Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 RARS-210ENST00000626454 177 ntTSL 5 BASIC12.3□□□□□ -0.44
NPIPA3F8WFD2 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC12.3□□□□□ -0.44
NPIPA3F8WFD2 ESR1-214ENST00000638569 132 ntTSL 5 BASIC12.3□□□□□ -0.44
NPIPA3F8WFD2 MEF2D-204ENST00000464356 5598 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
NPIPA3F8WFD2 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
NPIPA3F8WFD2 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC12.3□□□□□ -0.44
NPIPA3F8WFD2 CDH4-203ENST00000614565 6513 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
NPIPA3F8WFD2 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC12.3□□□□□ -0.44
NPIPA3F8WFD2 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
NPIPA3F8WFD2 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
NPIPA3F8WFD2 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
NPIPA3F8WFD2 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
NPIPA3F8WFD2 EIF3A-201ENST00000369144 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
NPIPA3F8WFD2 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
NPIPA3F8WFD2 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
NPIPA3F8WFD2 FAM95B1-212ENST00000592873 4692 ntBASIC12.3□□□□□ -0.44
NPIPA3F8WFD2 STRIP2-201ENST00000249344 5115 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
NPIPA3F8WFD2 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
NPIPA3F8WFD2 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
NPIPA3F8WFD2 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC12.3□□□□□ -0.44
NPIPA3F8WFD2 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC12.3□□□□□ -0.44
NPIPA3F8WFD2 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
NPIPA3F8WFD2 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
NPIPA3F8WFD2 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC12.3□□□□□ -0.44
NPIPA3F8WFD2 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
NPIPA3F8WFD2 POLL-206ENST00000370172 2308 ntTSL 2 BASIC12.29□□□□□ -0.44
NPIPA3F8WFD2 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
NPIPA3F8WFD2 GATC-203ENST00000551765 4244 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
NPIPA3F8WFD2 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
NPIPA3F8WFD2 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
NPIPA3F8WFD2 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
NPIPA3F8WFD2 COG5-201ENST00000297135 4060 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
NPIPA3F8WFD2 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
NPIPA3F8WFD2 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
NPIPA3F8WFD2 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
NPIPA3F8WFD2 ANKRD52-201ENST00000267116 8688 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
NPIPA3F8WFD2 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
NPIPA3F8WFD2 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC12.29□□□□□ -0.44
NPIPA3F8WFD2 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
NPIPA3F8WFD2 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
NPIPA3F8WFD2 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
NPIPA3F8WFD2 FAM157A-203ENST00000634862 6083 ntTSL 5 BASIC12.29□□□□□ -0.44
NPIPA3F8WFD2 SH3BGRL3-202ENST00000319041 768 ntTSL 2 BASIC12.29□□□□□ -0.44
NPIPA3F8WFD2 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
NPIPA3F8WFD2 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
NPIPA3F8WFD2 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC12.29□□□□□ -0.44
NPIPA3F8WFD2 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC12.29□□□□□ -0.44
NPIPA3F8WFD2 AL121787.1-202ENST00000445838 876 ntTSL 5 BASIC12.29□□□□□ -0.44
NPIPA3F8WFD2 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC12.29□□□□□ -0.44
NPIPA3F8WFD2 RN7SL128P-201ENST00000467883 305 ntBASIC12.29□□□□□ -0.44
NPIPA3F8WFD2 RN7SL147P-201ENST00000487345 298 ntBASIC12.29□□□□□ -0.44
NPIPA3F8WFD2 F11R-204ENST00000537746 1245 ntTSL 2 BASIC12.29□□□□□ -0.44
NPIPA3F8WFD2 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
NPIPA3F8WFD2 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC12.29□□□□□ -0.44
NPIPA3F8WFD2 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC12.29□□□□□ -0.44
NPIPA3F8WFD2 ABHD17AP9-201ENST00000561925 548 ntBASIC12.29□□□□□ -0.44
NPIPA3F8WFD2 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
NPIPA3F8WFD2 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
NPIPA3F8WFD2 ETV4-208ENST00000586826 917 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
NPIPA3F8WFD2 AC016586.1-201ENST00000600056 684 ntTSL 3 BASIC12.29□□□□□ -0.44
NPIPA3F8WFD2 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC12.29□□□□□ -0.44
NPIPA3F8WFD2 AC026336.4-201ENST00000624565 1050 ntBASIC12.29□□□□□ -0.44
NPIPA3F8WFD2 AC139713.2-207ENST00000641556 1292 ntBASIC12.29□□□□□ -0.44
NPIPA3F8WFD2 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
NPIPA3F8WFD2 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC12.29□□□□□ -0.44
NPIPA3F8WFD2 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
NPIPA3F8WFD2 DYRK4-201ENST00000010132 1840 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
NPIPA3F8WFD2 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
NPIPA3F8WFD2 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
NPIPA3F8WFD2 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC12.29□□□□□ -0.44
NPIPA3F8WFD2 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
NPIPA3F8WFD2 HTR2C-201ENST00000276198 4751 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
NPIPA3F8WFD2 LIN54-201ENST00000340417 6127 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
NPIPA3F8WFD2 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
NPIPA3F8WFD2 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC12.29□□□□□ -0.44
NPIPA3F8WFD2 AL031056.1-202ENST00000635954 2193 ntTSL 5 BASIC12.29□□□□□ -0.44
NPIPA3F8WFD2 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
NPIPA3F8WFD2 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC12.29□□□□□ -0.44
NPIPA3F8WFD2 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
NPIPA3F8WFD2 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
NPIPA3F8WFD2 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
NPIPA3F8WFD2 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
NPIPA3F8WFD2 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NPIPA3F8WFD2 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
NPIPA3F8WFD2 MSNP1-201ENST00000511640 1732 ntBASIC12.28□□□□□ -0.44
NPIPA3F8WFD2 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
NPIPA3F8WFD2 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
NPIPA3F8WFD2 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NPIPA3F8WFD2 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC12.28□□□□□ -0.44
NPIPA3F8WFD2 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NPIPA3F8WFD2 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NPIPA3F8WFD2 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC12.28□□□□□ -0.44
NPIPA3F8WFD2 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
NPIPA3F8WFD2 BRD1-201ENST00000216267 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NPIPA3F8WFD2 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NPIPA3F8WFD2 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
NPIPA3F8WFD2 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC12.28□□□□□ -0.44
NPIPA3F8WFD2 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
NPIPA3F8WFD2 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
NPIPA3F8WFD2 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms