Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
SSR1P43307 GHET1-201ENST00000627071 1906 ntBASIC14.47□□□□□ -0.09
SSR1P43307 C12orf56-201ENST00000333722 3936 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SSR1P43307 FOXN4-202ENST00000355216 2958 ntTSL 2 BASIC14.46□□□□□ -0.09
SSR1P43307 AC023355.1-202ENST00000612262 4242 ntTSL 5 BASIC14.46□□□□□ -0.09
SSR1P43307 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
SSR1P43307 GMEB2-201ENST00000266068 4559 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
SSR1P43307 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SSR1P43307 ZFYVE19-215ENST00000570108 1669 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
SSR1P43307 ETNPPL-202ENST00000411864 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SSR1P43307 LAS1L-202ENST00000374807 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SSR1P43307 DLGAP1-212ENST00000515196 5314 ntTSL 2 BASIC14.46□□□□□ -0.09
SSR1P43307 CDC14B-201ENST00000375240 2547 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SSR1P43307 AKR1C8P-201ENST00000578467 2182 ntTSL 2 BASIC14.46□□□□□ -0.09
SSR1P43307 SLC6A6-204ENST00000613060 6526 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SSR1P43307 RIN2-202ENST00000440354 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SSR1P43307 LINC00969-231ENST00000597482 1476 ntTSL 5 BASIC14.46□□□□□ -0.09
SSR1P43307 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SSR1P43307 RIPK4-202ENST00000352483 4016 ntTSL 5 BASIC14.46□□□□□ -0.09
SSR1P43307 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SSR1P43307 CCBE1-202ENST00000439986 6227 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SSR1P43307 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
SSR1P43307 KCNMA1-208ENST00000372440 3849 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
SSR1P43307 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC14.46□□□□□ -0.09
SSR1P43307 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SSR1P43307 AL583805.1-201ENST00000391389 531 ntBASIC14.46□□□□□ -0.09
SSR1P43307 MIR1247-201ENST00000408206 136 ntBASIC14.46□□□□□ -0.09
SSR1P43307 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SSR1P43307 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC14.46□□□□□ -0.09
SSR1P43307 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC14.46□□□□□ -0.09
SSR1P43307 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC14.46□□□□□ -0.09
SSR1P43307 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
SSR1P43307 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
SSR1P43307 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SSR1P43307 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC14.46□□□□□ -0.09
SSR1P43307 NAT9-220ENST00000582870 896 ntTSL 5 BASIC14.46□□□□□ -0.09
SSR1P43307 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC14.46□□□□□ -0.09
SSR1P43307 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
SSR1P43307 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC14.46□□□□□ -0.09
SSR1P43307 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
SSR1P43307 KCNMA1-227ENST00000638203 3840 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
SSR1P43307 KCNMA1-232ENST00000638306 3811 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
SSR1P43307 KCNMA1-233ENST00000638351 3849 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
SSR1P43307 TIAM1-206ENST00000541036 7018 ntTSL 5 BASIC14.46□□□□□ -0.09
SSR1P43307 ALDH7A1-234ENST00000637782 1773 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
SSR1P43307 FMNL1-202ENST00000331495 4101 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SSR1P43307 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SSR1P43307 EBF2-203ENST00000520164 5145 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
SSR1P43307 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SSR1P43307 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SSR1P43307 POM121L14P-201ENST00000406100 1558 ntBASIC14.46□□□□□ -0.09
SSR1P43307 VENTXP1-201ENST00000569334 2716 ntBASIC14.46□□□□□ -0.09
SSR1P43307 PNPLA6-204ENST00000545201 4502 ntTSL 2 BASIC14.46□□□□□ -0.1
SSR1P43307 AC008132.1-202ENST00000342005 1389 ntBASIC14.46□□□□□ -0.1
SSR1P43307 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC14.46□□□□□ -0.1
SSR1P43307 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC14.46□□□□□ -0.1
SSR1P43307 FN1-201ENST00000323926 8708 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
SSR1P43307 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
SSR1P43307 XBP1-204ENST00000405219 1690 ntTSL 2 BASIC14.46□□□□□ -0.1
SSR1P43307 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
SSR1P43307 AP003969.2-201ENST00000623739 2275 ntBASIC14.45□□□□□ -0.1
SSR1P43307 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SSR1P43307 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC14.45□□□□□ -0.1
SSR1P43307 IKBKB-218ENST00000520835 2403 ntTSL 2 BASIC14.45□□□□□ -0.1
SSR1P43307 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC14.45□□□□□ -0.1
SSR1P43307 PDE2A-218ENST00000540345 3027 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SSR1P43307 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
SSR1P43307 LINC01544-201ENST00000567801 5168 ntTSL 2 BASIC14.45□□□□□ -0.1
SSR1P43307 MAP3K9-205ENST00000554752 11169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SSR1P43307 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SSR1P43307 MKL1-210ENST00000614754 3917 ntTSL 5 BASIC14.45□□□□□ -0.1
SSR1P43307 COASY-202ENST00000421097 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SSR1P43307 MMD2-203ENST00000406755 2372 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SSR1P43307 TSC22D1-203ENST00000458659 4820 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SSR1P43307 MAP2K4P1-202ENST00000602584 2539 ntTSL 2 BASIC14.45□□□□□ -0.1
SSR1P43307 OTOF-203ENST00000339598 4756 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SSR1P43307 ZNF106-205ENST00000565611 5081 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SSR1P43307 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SSR1P43307 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC14.45□□□□□ -0.1
SSR1P43307 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SSR1P43307 AC106827.1-201ENST00000366454 431 ntBASIC14.45□□□□□ -0.1
SSR1P43307 CEP170-204ENST00000366544 6805 ntTSL 5 BASIC14.45□□□□□ -0.1
SSR1P43307 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SSR1P43307 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
SSR1P43307 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC14.45□□□□□ -0.1
SSR1P43307 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SSR1P43307 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SSR1P43307 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
SSR1P43307 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC14.45□□□□□ -0.1
SSR1P43307 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC14.45□□□□□ -0.1
SSR1P43307 AC098934.1-203ENST00000442868 1262 ntBASIC14.45□□□□□ -0.1
SSR1P43307 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SSR1P43307 BX284668.4-201ENST00000453917 508 ntBASIC14.45□□□□□ -0.1
SSR1P43307 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC14.45□□□□□ -0.1
SSR1P43307 RPL18AP8-201ENST00000486071 528 ntBASIC14.45□□□□□ -0.1
SSR1P43307 ZNF767P-206ENST00000513792 565 ntBASIC14.45□□□□□ -0.1
SSR1P43307 LOXHD1-210ENST00000536736 6848 ntAPPRIS P5 TSL 5 BASIC14.45□□□□□ -0.1
SSR1P43307 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC14.45□□□□□ -0.1
SSR1P43307 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SSR1P43307 AC090617.6-201ENST00000572790 443 ntTSL 3 BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms