Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLCN1P35523 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
CLCN1P35523 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLCN1P35523 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
CLCN1P35523 HNRNPA1P63-201ENST00000427917 963 ntBASIC15.38■□□□□ 0.05
CLCN1P35523 OR2R1P-201ENST00000441404 914 ntBASIC15.38■□□□□ 0.05
CLCN1P35523 ATP5G2P4-201ENST00000442175 420 ntBASIC15.38■□□□□ 0.05
CLCN1P35523 TUBB8P8-201ENST00000458717 1058 ntBASIC15.38■□□□□ 0.05
CLCN1P35523 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CLCN1P35523 HLA-J-204ENST00000495278 958 ntBASIC15.38■□□□□ 0.05
CLCN1P35523 CD74-212ENST00000524315 584 ntTSL 5 BASIC15.38■□□□□ 0.05
CLCN1P35523 AGER-214ENST00000538695 487 ntTSL 2 BASIC15.38■□□□□ 0.05
CLCN1P35523 NOP2-220ENST00000545915 630 ntTSL 2 BASIC15.38■□□□□ 0.05
CLCN1P35523 PGAM1P5-201ENST00000548011 764 ntBASIC15.38■□□□□ 0.05
CLCN1P35523 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC15.38■□□□□ 0.05
CLCN1P35523 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC15.38■□□□□ 0.05
CLCN1P35523 RN7SL718P-201ENST00000581254 303 ntBASIC15.38■□□□□ 0.05
CLCN1P35523 DRG2-220ENST00000583355 891 ntTSL 3 BASIC15.38■□□□□ 0.05
CLCN1P35523 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC15.38■□□□□ 0.05
CLCN1P35523 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CLCN1P35523 AC022748.3-201ENST00000621828 275 ntBASIC15.38■□□□□ 0.05
CLCN1P35523 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLCN1P35523 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC15.38■□□□□ 0.05
CLCN1P35523 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLCN1P35523 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC15.38■□□□□ 0.05
CLCN1P35523 CNBP-207ENST00000502976 1626 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLCN1P35523 ARHGEF9-235ENST00000637723 2146 ntTSL 5 BASIC15.38■□□□□ 0.05
CLCN1P35523 DLC1-210ENST00000512044 3758 ntTSL 2 BASIC15.38■□□□□ 0.05
CLCN1P35523 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLCN1P35523 HPSE-201ENST00000311412 4615 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLCN1P35523 TAF5L-204ENST00000366676 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLCN1P35523 ITPRIP-203ENST00000358187 3981 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
CLCN1P35523 AC006480.2-201ENST00000609770 1337 ntBASIC15.38■□□□□ 0.05
CLCN1P35523 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CLCN1P35523 TP53-208ENST00000504290 2331 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CLCN1P35523 TP53-220ENST00000610623 2331 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CLCN1P35523 CR2-203ENST00000367059 3877 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CLCN1P35523 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLCN1P35523 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CLCN1P35523 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC15.38■□□□□ 0.05
CLCN1P35523 GGPS1-202ENST00000358966 2740 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
CLCN1P35523 TOMM40L-202ENST00000367988 2708 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
CLCN1P35523 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
CLCN1P35523 PKM-222ENST00000568883 1863 ntTSL 5 BASIC15.37■□□□□ 0.05
CLCN1P35523 FBXO9-202ENST00000323557 3418 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLCN1P35523 KRT8P29-201ENST00000420409 1371 ntBASIC15.37■□□□□ 0.05
CLCN1P35523 CEP89-207ENST00000591863 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLCN1P35523 MIR194-2HG-201ENST00000413053 3647 ntTSL 2 BASIC15.37■□□□□ 0.05
CLCN1P35523 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC15.37■□□□□ 0.05
CLCN1P35523 PPP3CB-204ENST00000394829 3149 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLCN1P35523 MYO9A-202ENST00000424560 4008 ntTSL 5 BASIC15.37■□□□□ 0.05
CLCN1P35523 ZNF606-201ENST00000341164 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLCN1P35523 CNTROB-202ENST00000563694 3705 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLCN1P35523 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLCN1P35523 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CLCN1P35523 ST5-230ENST00000530438 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLCN1P35523 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CLCN1P35523 SCML1-204ENST00000398080 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLCN1P35523 XPC-201ENST00000285021 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLCN1P35523 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLCN1P35523 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLCN1P35523 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
CLCN1P35523 BTBD6P1-201ENST00000412176 1267 ntBASIC15.37■□□□□ 0.05
CLCN1P35523 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CLCN1P35523 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC15.37■□□□□ 0.05
CLCN1P35523 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC15.37■□□□□ 0.05
CLCN1P35523 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLCN1P35523 AP002336.2-201ENST00000528607 539 ntTSL 5 BASIC15.37■□□□□ 0.05
CLCN1P35523 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC15.37■□□□□ 0.05
CLCN1P35523 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CLCN1P35523 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC15.37■□□□□ 0.05
CLCN1P35523 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC15.37■□□□□ 0.05
CLCN1P35523 BNIP3P13-201ENST00000599968 566 ntBASIC15.37■□□□□ 0.05
CLCN1P35523 RUBCN-202ENST00000296343 2919 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLCN1P35523 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC15.37■□□□□ 0.05
CLCN1P35523 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLCN1P35523 AC138028.6-201ENST00000616106 1482 ntBASIC15.37■□□□□ 0.05
CLCN1P35523 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC15.37■□□□□ 0.05
CLCN1P35523 LINC00473-205ENST00000584911 2212 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CLCN1P35523 TXNRD1-202ENST00000388854 4277 ntTSL 5 BASIC15.37■□□□□ 0.05
CLCN1P35523 LINC01141-203ENST00000426428 2993 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CLCN1P35523 ATP13A2-203ENST00000452699 3981 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLCN1P35523 LRTM2-208ENST00000543818 3986 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
CLCN1P35523 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC15.37■□□□□ 0.05
CLCN1P35523 PSMD5-201ENST00000210313 3443 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLCN1P35523 GMEB2-201ENST00000266068 4559 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
CLCN1P35523 MBOAT4-201ENST00000320542 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLCN1P35523 ATP6V0A4-203ENST00000393054 3090 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
CLCN1P35523 PPP4R1-202ENST00000400555 3885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLCN1P35523 RSBN1-206ENST00000616024 2703 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CLCN1P35523 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CLCN1P35523 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC15.37■□□□□ 0.05
CLCN1P35523 POU2F2-201ENST00000342301 3730 ntTSL 5 BASIC15.37■□□□□ 0.05
CLCN1P35523 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC15.36■□□□□ 0.05
CLCN1P35523 ARHGEF33-201ENST00000398800 4300 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
CLCN1P35523 LINC01634-201ENST00000443243 2379 ntTSL 2 BASIC15.36■□□□□ 0.05
CLCN1P35523 RCBTB2-206ENST00000544904 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLCN1P35523 PDE4C-206ENST00000594465 2988 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLCN1P35523 PPP4R3A-206ENST00000554943 3369 ntTSL 5 BASIC15.36■□□□□ 0.05
CLCN1P35523 PPP1R26P2-201ENST00000611403 3595 ntBASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms