Protein–RNA interactions for Protein: Q9NUP7

TRMT13, tRNA:m(4)X modification enzyme TRM13 homolog, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT13Q9NUP7 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
TRMT13Q9NUP7 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRMT13Q9NUP7 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRMT13Q9NUP7 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRMT13Q9NUP7 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRMT13Q9NUP7 PSG8-AS1-201ENST00000425668 1873 ntTSL 2 BASIC14.61□□□□□ -0.07
TRMT13Q9NUP7 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC14.61□□□□□ -0.07
TRMT13Q9NUP7 DDR1-225ENST00000376568 3894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRMT13Q9NUP7 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
TRMT13Q9NUP7 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
TRMT13Q9NUP7 ZCCHC9-203ENST00000407610 1555 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
TRMT13Q9NUP7 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC14.61□□□□□ -0.07
TRMT13Q9NUP7 PPP1R26P2-201ENST00000611403 3595 ntBASIC14.61□□□□□ -0.07
TRMT13Q9NUP7 BEND3P1-201ENST00000421591 1944 ntBASIC14.61□□□□□ -0.07
TRMT13Q9NUP7 TMEM186-201ENST00000333050 1448 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRMT13Q9NUP7 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
TRMT13Q9NUP7 SLC25A30-207ENST00000539591 3608 ntTSL 2 BASIC14.61□□□□□ -0.07
TRMT13Q9NUP7 PCP2-201ENST00000311069 776 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRMT13Q9NUP7 KIR2DL4-207ENST00000396293 715 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRMT13Q9NUP7 ATP5J-204ENST00000400093 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRMT13Q9NUP7 ZNF589-202ENST00000412564 593 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRMT13Q9NUP7 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC14.61□□□□□ -0.07
TRMT13Q9NUP7 IQSEC2-205ENST00000498281 673 ntTSL 3 BASIC14.61□□□□□ -0.07
TRMT13Q9NUP7 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC14.61□□□□□ -0.07
TRMT13Q9NUP7 HNRNPA1P55-201ENST00000505935 955 ntBASIC14.61□□□□□ -0.07
TRMT13Q9NUP7 AC116552.1-201ENST00000563243 733 ntTSL 3 BASIC14.61□□□□□ -0.07
TRMT13Q9NUP7 HNRNPA1P11-201ENST00000580106 956 ntBASIC14.61□□□□□ -0.07
TRMT13Q9NUP7 MIR4526-201ENST00000583168 87 ntBASIC14.61□□□□□ -0.07
TRMT13Q9NUP7 AC005332.2-201ENST00000590010 930 ntBASIC14.61□□□□□ -0.07
TRMT13Q9NUP7 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRMT13Q9NUP7 AL137028.2-201ENST00000614601 256 ntBASIC14.61□□□□□ -0.07
TRMT13Q9NUP7 Metazoa_SRP.47-201ENST00000616942 279 ntBASIC14.61□□□□□ -0.07
TRMT13Q9NUP7 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
TRMT13Q9NUP7 AL359915.2-202ENST00000440150 2469 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRMT13Q9NUP7 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.61□□□□□ -0.07
TRMT13Q9NUP7 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRMT13Q9NUP7 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRMT13Q9NUP7 CHCHD7-218ENST00000523975 1805 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRMT13Q9NUP7 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRMT13Q9NUP7 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC14.61□□□□□ -0.07
TRMT13Q9NUP7 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRMT13Q9NUP7 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRMT13Q9NUP7 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRMT13Q9NUP7 MBOAT4-201ENST00000320542 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRMT13Q9NUP7 GLT6D1-201ENST00000371763 1526 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRMT13Q9NUP7 GLT6D1-202ENST00000613244 1523 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
TRMT13Q9NUP7 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRMT13Q9NUP7 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRMT13Q9NUP7 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC14.61□□□□□ -0.07
TRMT13Q9NUP7 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRMT13Q9NUP7 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRMT13Q9NUP7 NAMA-207ENST00000605707 1748 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRMT13Q9NUP7 DDC-201ENST00000357936 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRMT13Q9NUP7 TUBB8P5-201ENST00000445286 1351 ntBASIC14.6□□□□□ -0.07
TRMT13Q9NUP7 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.6□□□□□ -0.07
TRMT13Q9NUP7 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRMT13Q9NUP7 PRR3-201ENST00000376557 1797 ntTSL 2 BASIC14.6□□□□□ -0.07
TRMT13Q9NUP7 ZNF143-202ENST00000396597 1954 ntTSL 2 BASIC14.6□□□□□ -0.07
TRMT13Q9NUP7 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.6□□□□□ -0.07
TRMT13Q9NUP7 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRMT13Q9NUP7 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRMT13Q9NUP7 Z97653.2-201ENST00000623057 1418 ntBASIC14.6□□□□□ -0.07
TRMT13Q9NUP7 AL391097.1-201ENST00000432706 1620 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRMT13Q9NUP7 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRMT13Q9NUP7 AC007191.1-201ENST00000623179 2995 ntBASIC14.6□□□□□ -0.07
TRMT13Q9NUP7 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRMT13Q9NUP7 STT3A-211ENST00000529196 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRMT13Q9NUP7 MB-204ENST00000401702 1043 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRMT13Q9NUP7 WDR54-202ENST00000409791 854 ntTSL 3 BASIC14.6□□□□□ -0.07
TRMT13Q9NUP7 TMEM256P1-201ENST00000430550 340 ntBASIC14.6□□□□□ -0.07
TRMT13Q9NUP7 PTPA-219ENST00000435305 530 ntTSL 2 BASIC14.6□□□□□ -0.07
TRMT13Q9NUP7 LINC01824-201ENST00000436082 528 ntTSL 4 BASIC14.6□□□□□ -0.07
TRMT13Q9NUP7 AC078882.1-201ENST00000436132 416 ntTSL 2 BASIC14.6□□□□□ -0.07
TRMT13Q9NUP7 AP000959.1-201ENST00000441759 977 ntTSL 3 BASIC14.6□□□□□ -0.07
TRMT13Q9NUP7 PDLIM2-212ENST00000443561 701 ntTSL 2 BASIC14.6□□□□□ -0.07
TRMT13Q9NUP7 LINC00299-203ENST00000444688 537 ntTSL 4 BASIC14.6□□□□□ -0.07
TRMT13Q9NUP7 AC025822.1-201ENST00000455525 633 ntTSL 2 BASIC14.6□□□□□ -0.07
TRMT13Q9NUP7 SLC25A15P1-201ENST00000456738 342 ntBASIC14.6□□□□□ -0.07
TRMT13Q9NUP7 PSMB8-AS1-206ENST00000458296 958 ntTSL 3 BASIC14.6□□□□□ -0.07
TRMT13Q9NUP7 ALDOAP1-201ENST00000491506 1078 ntBASIC14.6□□□□□ -0.07
TRMT13Q9NUP7 CCDC42-202ENST00000539522 1087 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRMT13Q9NUP7 MRPL51-205ENST00000543164 814 ntTSL 2 BASIC14.6□□□□□ -0.07
TRMT13Q9NUP7 MRPL51-206ENST00000543703 441 ntTSL 3 BASIC14.6□□□□□ -0.07
TRMT13Q9NUP7 GOLGA2P10-201ENST00000550961 817 ntBASIC14.6□□□□□ -0.07
TRMT13Q9NUP7 AC090950.1-202ENST00000605733 644 ntBASIC14.6□□□□□ -0.07
TRMT13Q9NUP7 AC092687.3-201ENST00000606907 393 ntTSL 5 BASIC14.6□□□□□ -0.07
TRMT13Q9NUP7 AC006273.1-201ENST00000606966 861 ntBASIC14.6□□□□□ -0.07
TRMT13Q9NUP7 AL450487.2-201ENST00000615934 407 ntBASIC14.6□□□□□ -0.07
TRMT13Q9NUP7 AL139220.2-222ENST00000627999 756 ntTSL 5 BASIC14.6□□□□□ -0.07
TRMT13Q9NUP7 SKAP1-208ENST00000584924 1477 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
TRMT13Q9NUP7 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRMT13Q9NUP7 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC14.6□□□□□ -0.07
TRMT13Q9NUP7 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
TRMT13Q9NUP7 GAPDH-205ENST00000396861 1348 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
TRMT13Q9NUP7 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRMT13Q9NUP7 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRMT13Q9NUP7 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC14.6□□□□□ -0.07
TRMT13Q9NUP7 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
TRMT13Q9NUP7 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRMT13Q9NUP7 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms