Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 AC024075.2-201ENST00000598112 1473 ntBASIC12.14□□□□□ -0.47
ATRXP46100 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
ATRXP46100 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ATRXP46100 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ATRXP46100 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ATRXP46100 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
ATRXP46100 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ATRXP46100 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
ATRXP46100 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
ATRXP46100 QRFPR-201ENST00000334383 1215 ntTSL 2 BASIC12.14□□□□□ -0.47
ATRXP46100 SCGB1C1-201ENST00000342878 431 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ATRXP46100 RN7SKP255-201ENST00000363442 313 ntBASIC12.14□□□□□ -0.47
ATRXP46100 RN7SKP203-201ENST00000363618 332 ntBASIC12.14□□□□□ -0.47
ATRXP46100 RN7SKP71-201ENST00000364558 318 ntBASIC12.14□□□□□ -0.47
ATRXP46100 7SK.1-201ENST00000365328 331 ntBASIC12.14□□□□□ -0.47
ATRXP46100 SPINK4-201ENST00000379721 402 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ATRXP46100 HMGA1P1-201ENST00000415560 1062 ntBASIC12.14□□□□□ -0.47
ATRXP46100 AC009404.1-202ENST00000439955 968 ntTSL 3 BASIC12.14□□□□□ -0.47
ATRXP46100 LAMTOR4-207ENST00000474141 519 ntTSL 2 BASIC12.14□□□□□ -0.47
ATRXP46100 AC084033.3-203ENST00000546580 571 ntTSL 2 BASIC12.14□□□□□ -0.47
ATRXP46100 SNAPC5-207ENST00000566658 574 ntAPPRIS ALT2 TSL 4 BASIC12.14□□□□□ -0.47
ATRXP46100 AC009034.1-201ENST00000568125 669 ntTSL 2 BASIC12.14□□□□□ -0.47
ATRXP46100 MIR6074-201ENST00000612054 107 ntBASIC12.14□□□□□ -0.47
ATRXP46100 GPHB5-202ENST00000621500 543 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
ATRXP46100 AC083841.4-201ENST00000637396 352 ntBASIC12.14□□□□□ -0.47
ATRXP46100 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
ATRXP46100 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
ATRXP46100 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ATRXP46100 AC106799.1-201ENST00000503188 1676 ntTSL 2 BASIC12.14□□□□□ -0.47
ATRXP46100 DKFZP434A062-201ENST00000573103 5021 ntBASIC12.14□□□□□ -0.47
ATRXP46100 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC12.14□□□□□ -0.47
ATRXP46100 FES-204ENST00000414248 2327 ntTSL 2 BASIC12.14□□□□□ -0.47
ATRXP46100 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
ATRXP46100 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ATRXP46100 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC12.14□□□□□ -0.47
ATRXP46100 ATP6V0D1-218ENST00000602876 1554 ntTSL 5 BASIC12.14□□□□□ -0.47
ATRXP46100 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ATRXP46100 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
ATRXP46100 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
ATRXP46100 KIR2DP1-201ENST00000415311 1331 ntBASIC12.14□□□□□ -0.47
ATRXP46100 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ATRXP46100 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ATRXP46100 LINC02154-201ENST00000412485 1497 ntTSL 2 BASIC12.13□□□□□ -0.47
ATRXP46100 AP000787.1-205ENST00000536683 1485 ntTSL 5 BASIC12.13□□□□□ -0.47
ATRXP46100 SKAP1-208ENST00000584924 1477 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
ATRXP46100 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ATRXP46100 KATNAL1-202ENST00000380617 1634 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
ATRXP46100 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ATRXP46100 SH3BGRL2-201ENST00000369838 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ATRXP46100 HPGD-204ENST00000504433 1910 ntTSL 2 BASIC12.13□□□□□ -0.47
ATRXP46100 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
ATRXP46100 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
ATRXP46100 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
ATRXP46100 AC090505.1-201ENST00000430515 1834 ntBASIC12.13□□□□□ -0.47
ATRXP46100 AC111188.1-201ENST00000525758 1833 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ATRXP46100 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ATRXP46100 SNORA80B-201ENST00000383906 136 ntBASIC12.13□□□□□ -0.47
ATRXP46100 HIST1H2BN-201ENST00000396980 432 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
ATRXP46100 SNORA50D-201ENST00000408059 134 ntBASIC12.13□□□□□ -0.47
ATRXP46100 ITPKB-IT1-201ENST00000412918 746 ntTSL 2 BASIC12.13□□□□□ -0.47
ATRXP46100 AL035250.2-201ENST00000440889 620 ntTSL 3 BASIC12.13□□□□□ -0.47
ATRXP46100 LINC02151-201ENST00000452629 921 ntTSL 2 BASIC12.13□□□□□ -0.47
ATRXP46100 WASH6P-207ENST00000476066 720 ntTSL 5 BASIC12.13□□□□□ -0.47
ATRXP46100 AC011491.3-201ENST00000595644 559 ntTSL 4 BASIC12.13□□□□□ -0.47
ATRXP46100 IGKV1D-13-201ENST00000611391 376 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
ATRXP46100 RPS9-213ENST00000626547 476 ntTSL 2 BASIC12.13□□□□□ -0.47
ATRXP46100 AC099795.2-201ENST00000639582 440 ntBASIC12.13□□□□□ -0.47
ATRXP46100 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC12.13□□□□□ -0.47
ATRXP46100 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ATRXP46100 VWA5B1-201ENST00000289815 4475 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
ATRXP46100 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
ATRXP46100 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
ATRXP46100 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
ATRXP46100 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ATRXP46100 ANKDD1A-207ENST00000496660 1477 ntTSL 2 BASIC12.13□□□□□ -0.47
ATRXP46100 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
ATRXP46100 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
ATRXP46100 CDCA7L-202ENST00000373934 1830 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
ATRXP46100 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ATRXP46100 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC12.13□□□□□ -0.47
ATRXP46100 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC12.13□□□□□ -0.47
ATRXP46100 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
ATRXP46100 PAGE4-202ENST00000376141 487 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
ATRXP46100 CA6-201ENST00000377436 942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
ATRXP46100 CA6-202ENST00000377442 747 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ATRXP46100 AL161937.2-202ENST00000435301 733 ntTSL 3 BASIC12.13□□□□□ -0.47
ATRXP46100 AC067942.1-202ENST00000471756 1057 ntBASIC12.13□□□□□ -0.47
ATRXP46100 HNRNPA1P4-201ENST00000509706 756 ntBASIC12.13□□□□□ -0.47
ATRXP46100 AC010395.2-201ENST00000509899 904 ntBASIC12.13□□□□□ -0.47
ATRXP46100 AC104117.1-201ENST00000517817 900 ntBASIC12.13□□□□□ -0.47
ATRXP46100 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC12.13□□□□□ -0.47
ATRXP46100 AC010615.2-201ENST00000596705 566 ntTSL 4 BASIC12.13□□□□□ -0.47
ATRXP46100 AC006262.2-202ENST00000600152 333 ntTSL 2 BASIC12.13□□□□□ -0.47
ATRXP46100 AC099343.2-201ENST00000605082 686 ntBASIC12.13□□□□□ -0.47
ATRXP46100 AL590094.1-206ENST00000635959 478 ntTSL 5 BASIC12.13□□□□□ -0.47
ATRXP46100 AL590094.1-209ENST00000637260 499 ntTSL 5 BASIC12.13□□□□□ -0.47
ATRXP46100 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ATRXP46100 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
ATRXP46100 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ATRXP46100 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms