Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC12.42□□□□□ -0.42
RFC3P40938 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC12.42□□□□□ -0.42
RFC3P40938 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC12.42□□□□□ -0.42
RFC3P40938 AL365500.1-201ENST00000442783 868 ntTSL 3 BASIC12.42□□□□□ -0.42
RFC3P40938 VENTXP4-201ENST00000449029 958 ntBASIC12.42□□□□□ -0.42
RFC3P40938 AC074389.3-201ENST00000450458 454 ntTSL 3 BASIC12.42□□□□□ -0.42
RFC3P40938 AC244197.1-201ENST00000456494 951 ntBASIC12.42□□□□□ -0.42
RFC3P40938 AC026470.1-201ENST00000478038 846 ntBASIC12.42□□□□□ -0.42
RFC3P40938 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
RFC3P40938 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RFC3P40938 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
RFC3P40938 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RFC3P40938 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
RFC3P40938 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
RFC3P40938 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC12.42□□□□□ -0.42
RFC3P40938 ETV2-207ENST00000619399 994 ntTSL 5 BASIC12.42□□□□□ -0.42
RFC3P40938 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC12.42□□□□□ -0.42
RFC3P40938 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RFC3P40938 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
RFC3P40938 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC12.42□□□□□ -0.42
RFC3P40938 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
RFC3P40938 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC12.42□□□□□ -0.42
RFC3P40938 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC12.42□□□□□ -0.42
RFC3P40938 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC12.42□□□□□ -0.42
RFC3P40938 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RFC3P40938 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
RFC3P40938 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RFC3P40938 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC12.42□□□□□ -0.42
RFC3P40938 EHMT2-202ENST00000375530 3856 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
RFC3P40938 OS9-218ENST00000551035 2246 ntTSL 2 BASIC12.42□□□□□ -0.42
RFC3P40938 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
RFC3P40938 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RFC3P40938 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC12.42□□□□□ -0.42
RFC3P40938 KRT8P42-201ENST00000405771 1399 ntBASIC12.42□□□□□ -0.42
RFC3P40938 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC12.42□□□□□ -0.42
RFC3P40938 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
RFC3P40938 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RFC3P40938 DDC-212ENST00000615193 1674 ntTSL 3 BASIC12.42□□□□□ -0.42
RFC3P40938 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RFC3P40938 TMEM123-202ENST00000398136 3579 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
RFC3P40938 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RFC3P40938 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC12.41□□□□□ -0.42
RFC3P40938 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC12.41□□□□□ -0.42
RFC3P40938 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RFC3P40938 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC12.41□□□□□ -0.42
RFC3P40938 RAB37-202ENST00000392610 2858 ntTSL 3 BASIC12.41□□□□□ -0.42
RFC3P40938 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
RFC3P40938 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RFC3P40938 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
RFC3P40938 Z82195.2-202ENST00000458525 1646 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RFC3P40938 RNF121-211ENST00000530137 2202 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RFC3P40938 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC12.41□□□□□ -0.42
RFC3P40938 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
RFC3P40938 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
RFC3P40938 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RFC3P40938 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC12.41□□□□□ -0.42
RFC3P40938 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RFC3P40938 CAMP-201ENST00000296435 745 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RFC3P40938 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RFC3P40938 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RFC3P40938 U3.5-201ENST00000363448 216 ntBASIC12.41□□□□□ -0.42
RFC3P40938 PIFO-201ENST00000369737 746 ntTSL 2 BASIC12.41□□□□□ -0.42
RFC3P40938 ECI2-202ENST00000380118 1407 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RFC3P40938 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RFC3P40938 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
RFC3P40938 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC12.41□□□□□ -0.42
RFC3P40938 IDS-203ENST00000428056 1213 ntTSL 2 BASIC12.41□□□□□ -0.42
RFC3P40938 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC12.41□□□□□ -0.42
RFC3P40938 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC12.41□□□□□ -0.42
RFC3P40938 AL121787.1-202ENST00000445838 876 ntTSL 5 BASIC12.41□□□□□ -0.42
RFC3P40938 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
RFC3P40938 RPL29P2-202ENST00000498671 657 ntBASIC12.41□□□□□ -0.42
RFC3P40938 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RFC3P40938 LINC00301-203ENST00000527161 749 ntTSL 2 BASIC12.41□□□□□ -0.42
RFC3P40938 AC087203.1-201ENST00000532111 1181 ntBASIC12.41□□□□□ -0.42
RFC3P40938 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RFC3P40938 AC078814.4-201ENST00000546650 327 ntBASIC12.41□□□□□ -0.42
RFC3P40938 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC12.41□□□□□ -0.42
RFC3P40938 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
RFC3P40938 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC12.41□□□□□ -0.42
RFC3P40938 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RFC3P40938 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
RFC3P40938 CYP4F36P-201ENST00000589193 186 ntBASIC12.41□□□□□ -0.42
RFC3P40938 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC12.41□□□□□ -0.42
RFC3P40938 ESR1-214ENST00000638569 132 ntTSL 5 BASIC12.41□□□□□ -0.42
RFC3P40938 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RFC3P40938 PCDHA5-203ENST00000614258 4248 ntBASIC12.41□□□□□ -0.42
RFC3P40938 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC12.41□□□□□ -0.42
RFC3P40938 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RFC3P40938 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RFC3P40938 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RFC3P40938 FAM153C-201ENST00000398106 1510 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
RFC3P40938 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RFC3P40938 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RFC3P40938 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RFC3P40938 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC12.41□□□□□ -0.42
RFC3P40938 PRMT5-202ENST00000324366 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RFC3P40938 AGPAT1-203ENST00000375107 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RFC3P40938 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RFC3P40938 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms