Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 AL627231.1-201ENST00000394467 1125 ntBASIC13.23□□□□□ -0.29
PCNAP12004 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC13.23□□□□□ -0.29
PCNAP12004 PAX7-203ENST00000420770 5538 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PCNAP12004 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC13.23□□□□□ -0.29
PCNAP12004 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC13.23□□□□□ -0.29
PCNAP12004 ERP29P1-201ENST00000442902 706 ntBASIC13.23□□□□□ -0.29
PCNAP12004 SUPT4H1P2-201ENST00000501248 353 ntBASIC13.23□□□□□ -0.29
PCNAP12004 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC13.23□□□□□ -0.29
PCNAP12004 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC13.23□□□□□ -0.29
PCNAP12004 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC13.23□□□□□ -0.29
PCNAP12004 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC13.23□□□□□ -0.29
PCNAP12004 AC008687.7-203ENST00000598442 551 ntTSL 4 BASIC13.23□□□□□ -0.29
PCNAP12004 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
PCNAP12004 SMIM11B-202ENST00000619874 843 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PCNAP12004 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC13.23□□□□□ -0.29
PCNAP12004 AL139099.5-201ENST00000635274 300 ntBASIC13.23□□□□□ -0.29
PCNAP12004 AC006453.1-201ENST00000636037 1257 ntBASIC13.23□□□□□ -0.29
PCNAP12004 SETMAR-205ENST00000425863 1657 ntTSL 2 BASIC13.23□□□□□ -0.29
PCNAP12004 CCDC88C-204ENST00000389857 7474 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
PCNAP12004 NTRK2-203ENST00000323115 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PCNAP12004 KRT42P-202ENST00000438131 2895 ntTSL 2 BASIC13.23□□□□□ -0.29
PCNAP12004 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC13.23□□□□□ -0.29
PCNAP12004 GPATCH2L-202ENST00000312858 2438 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
PCNAP12004 EHMT2-203ENST00000375537 3965 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
PCNAP12004 LLGL1-203ENST00000621229 3187 ntTSL 5 BASIC13.23□□□□□ -0.29
PCNAP12004 PLEKHB2-202ENST00000403716 4349 ntTSL 3 BASIC13.23□□□□□ -0.29
PCNAP12004 DHX16-201ENST00000376437 1933 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
PCNAP12004 NOP2-212ENST00000541778 3038 ntTSL 2 BASIC13.23□□□□□ -0.29
PCNAP12004 CAPN1-202ENST00000524773 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PCNAP12004 AC007614.4-201ENST00000564048 1827 ntBASIC13.23□□□□□ -0.29
PCNAP12004 UBE2I-202ENST00000355803 3253 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
PCNAP12004 TMEM254-213ENST00000613758 2154 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
PCNAP12004 ZBED8-201ENST00000408953 2851 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
PCNAP12004 PPFIBP1-215ENST00000542629 3208 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
PCNAP12004 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PCNAP12004 SLC45A2-201ENST00000296589 1772 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PCNAP12004 SNX33-201ENST00000308527 8008 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PCNAP12004 PDZRN3-208ENST00000479530 2778 ntTSL 2 BASIC13.22□□□□□ -0.29
PCNAP12004 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC13.22□□□□□ -0.29
PCNAP12004 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC13.22□□□□□ -0.29
PCNAP12004 MRVI1-216ENST00000547195 6155 ntTSL 2 BASIC13.22□□□□□ -0.29
PCNAP12004 VDR-201ENST00000229022 4773 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
PCNAP12004 TMEM168-201ENST00000312814 7470 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PCNAP12004 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PCNAP12004 PHF10-206ENST00000621772 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
PCNAP12004 ZBED2-201ENST00000317012 2311 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
PCNAP12004 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC13.22□□□□□ -0.29
PCNAP12004 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC13.22□□□□□ -0.29
PCNAP12004 STAT3-203ENST00000404395 2633 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PCNAP12004 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
PCNAP12004 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC13.22□□□□□ -0.29
PCNAP12004 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC13.22□□□□□ -0.29
PCNAP12004 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PCNAP12004 AL662890.1-201ENST00000396818 632 ntBASIC13.22□□□□□ -0.29
PCNAP12004 GGTLC4P-201ENST00000402176 664 ntBASIC13.22□□□□□ -0.29
PCNAP12004 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
PCNAP12004 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC13.22□□□□□ -0.29
PCNAP12004 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC13.22□□□□□ -0.29
PCNAP12004 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
PCNAP12004 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC13.22□□□□□ -0.29
PCNAP12004 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
PCNAP12004 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC13.22□□□□□ -0.29
PCNAP12004 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC13.22□□□□□ -0.29
PCNAP12004 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PCNAP12004 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC13.22□□□□□ -0.29
PCNAP12004 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC13.22□□□□□ -0.29
PCNAP12004 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC13.22□□□□□ -0.29
PCNAP12004 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
PCNAP12004 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC13.22□□□□□ -0.29
PCNAP12004 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC13.22□□□□□ -0.29
PCNAP12004 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC13.22□□□□□ -0.29
PCNAP12004 MIR4522-201ENST00000584932 87 ntBASIC13.22□□□□□ -0.29
PCNAP12004 AC095350.1-204ENST00000585405 616 ntTSL 5 BASIC13.22□□□□□ -0.29
PCNAP12004 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC13.22□□□□□ -0.29
PCNAP12004 AC097724.1-201ENST00000609581 426 ntBASIC13.22□□□□□ -0.29
PCNAP12004 ACVR2A-201ENST00000241416 5728 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PCNAP12004 AC019109.1-201ENST00000401725 1874 ntBASIC13.22□□□□□ -0.29
PCNAP12004 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
PCNAP12004 ITGA3-201ENST00000007722 3665 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
PCNAP12004 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
PCNAP12004 FAM86C1-202ENST00000359244 2110 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
PCNAP12004 NLRP7-201ENST00000328092 3299 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
PCNAP12004 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PCNAP12004 AL390066.1-201ENST00000456414 2302 ntTSL 2 BASIC13.22□□□□□ -0.29
PCNAP12004 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PCNAP12004 TPO-202ENST00000345913 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PCNAP12004 SYK-204ENST00000375754 5005 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
PCNAP12004 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
PCNAP12004 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
PCNAP12004 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
PCNAP12004 GRAMD4-201ENST00000361034 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
PCNAP12004 AC022364.1-202ENST00000617468 2409 ntBASIC13.21□□□□□ -0.29
PCNAP12004 TLE3-220ENST00000559929 3408 ntTSL 5 BASIC13.21□□□□□ -0.29
PCNAP12004 NRXN1-259ENST00000637511 3651 ntTSL 5 BASIC13.21□□□□□ -0.29
PCNAP12004 STOX2-201ENST00000308497 10458 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
PCNAP12004 NHEJ1-201ENST00000356853 2094 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
PCNAP12004 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
PCNAP12004 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
PCNAP12004 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
PCNAP12004 OR2W2P-201ENST00000406313 909 ntBASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms