Protein–RNA interactions for Protein: Q9Y4K3

TRAF6, TNF receptor-associated factor 6, humanhuman

Predictions only

Length 522 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF6Q9Y4K3 MPHOSPH10-201ENST00000244230 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAF6Q9Y4K3 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
TRAF6Q9Y4K3 ITGA5-201ENST00000293379 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAF6Q9Y4K3 TSN-201ENST00000389682 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAF6Q9Y4K3 MATN2-211ENST00000521689 3554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAF6Q9Y4K3 CHTF18-201ENST00000262315 3090 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAF6Q9Y4K3 RGS16-201ENST00000367558 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAF6Q9Y4K3 PHB-215ENST00000617874 1908 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
TRAF6Q9Y4K3 AC000068.1-201ENST00000431090 2097 ntTSL 2 BASIC13.18□□□□□ -0.3
TRAF6Q9Y4K3 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRAF6Q9Y4K3 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
TRAF6Q9Y4K3 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAF6Q9Y4K3 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRAF6Q9Y4K3 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC13.18□□□□□ -0.3
TRAF6Q9Y4K3 DKKL1P1-201ENST00000400550 698 ntBASIC13.18□□□□□ -0.3
TRAF6Q9Y4K3 AC092573.1-201ENST00000433054 884 ntBASIC13.18□□□□□ -0.3
TRAF6Q9Y4K3 BUD31-205ENST00000456893 512 ntTSL 5 BASIC13.18□□□□□ -0.3
TRAF6Q9Y4K3 RPL18AP8-201ENST00000486071 528 ntBASIC13.18□□□□□ -0.3
TRAF6Q9Y4K3 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
TRAF6Q9Y4K3 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
TRAF6Q9Y4K3 NAT9-222ENST00000583476 583 ntTSL 3 BASIC13.18□□□□□ -0.3
TRAF6Q9Y4K3 MIR4687-201ENST00000583618 80 ntBASIC13.18□□□□□ -0.3
TRAF6Q9Y4K3 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC13.18□□□□□ -0.3
TRAF6Q9Y4K3 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC13.18□□□□□ -0.3
TRAF6Q9Y4K3 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
TRAF6Q9Y4K3 AC012073.1-201ENST00000606114 1108 ntBASIC13.18□□□□□ -0.3
TRAF6Q9Y4K3 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAF6Q9Y4K3 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAF6Q9Y4K3 MFSD11-201ENST00000336509 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAF6Q9Y4K3 PACSIN2-202ENST00000337959 3149 ntTSL 5 BASIC13.18□□□□□ -0.3
TRAF6Q9Y4K3 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAF6Q9Y4K3 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
TRAF6Q9Y4K3 SON-203ENST00000381679 7860 ntTSL 5 BASIC13.18□□□□□ -0.3
TRAF6Q9Y4K3 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAF6Q9Y4K3 DGCR2-206ENST00000545799 4484 ntTSL 5 BASIC13.18□□□□□ -0.3
TRAF6Q9Y4K3 DGKA-202ENST00000394147 2770 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
TRAF6Q9Y4K3 CPT1C-204ENST00000405931 2785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAF6Q9Y4K3 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRAF6Q9Y4K3 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAF6Q9Y4K3 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRAF6Q9Y4K3 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRAF6Q9Y4K3 EFHD1-203ENST00000409708 1817 ntTSL 2 BASIC13.18□□□□□ -0.3
TRAF6Q9Y4K3 HACD3-210ENST00000568793 1824 ntTSL 5 BASIC13.18□□□□□ -0.3
TRAF6Q9Y4K3 GOLGA8O-201ENST00000509311 1997 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
TRAF6Q9Y4K3 ARHGEF9-235ENST00000637723 2146 ntTSL 5 BASIC13.18□□□□□ -0.3
TRAF6Q9Y4K3 CLGN-201ENST00000325617 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAF6Q9Y4K3 NLGN3-206ENST00000612180 3319 ntTSL 5 BASIC13.18□□□□□ -0.3
TRAF6Q9Y4K3 CCDC187-204ENST00000624277 3918 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
TRAF6Q9Y4K3 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRAF6Q9Y4K3 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAF6Q9Y4K3 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
TRAF6Q9Y4K3 PLCB3-201ENST00000279230 4197 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAF6Q9Y4K3 GDPD5-204ENST00000526177 4150 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRAF6Q9Y4K3 ARHGAP33-203ENST00000314737 3858 ntAPPRIS P3 TSL 2 BASIC13.17□□□□□ -0.3
TRAF6Q9Y4K3 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
TRAF6Q9Y4K3 ZNF133-201ENST00000316358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAF6Q9Y4K3 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC13.17□□□□□ -0.3
TRAF6Q9Y4K3 KCNMA1-232ENST00000638306 3811 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
TRAF6Q9Y4K3 TMEM233-201ENST00000426426 3081 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
TRAF6Q9Y4K3 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC13.17□□□□□ -0.3
TRAF6Q9Y4K3 PRPF4-201ENST00000374198 2787 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAF6Q9Y4K3 KCNH1-205ENST00000638498 3479 ntTSL 5 BASIC13.17□□□□□ -0.3
TRAF6Q9Y4K3 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRAF6Q9Y4K3 IMMT-204ENST00000410111 3001 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAF6Q9Y4K3 SLC48A1-201ENST00000442218 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAF6Q9Y4K3 WTH3DI-201ENST00000623617 3032 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
TRAF6Q9Y4K3 MEP1A-201ENST00000230588 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAF6Q9Y4K3 NCBP1-202ENST00000375147 5178 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAF6Q9Y4K3 AC022098.1-201ENST00000588387 2861 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRAF6Q9Y4K3 SLC26A6-205ENST00000395550 2589 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAF6Q9Y4K3 ZNF654-204ENST00000636215 6446 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
TRAF6Q9Y4K3 VSTM2A-201ENST00000302287 3401 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRAF6Q9Y4K3 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
TRAF6Q9Y4K3 DMTF1-201ENST00000331242 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAF6Q9Y4K3 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAF6Q9Y4K3 AC016700.1-201ENST00000429424 312 ntBASIC13.17□□□□□ -0.3
TRAF6Q9Y4K3 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC13.17□□□□□ -0.3
TRAF6Q9Y4K3 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRAF6Q9Y4K3 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC13.17□□□□□ -0.3
TRAF6Q9Y4K3 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC13.17□□□□□ -0.3
TRAF6Q9Y4K3 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC13.17□□□□□ -0.3
TRAF6Q9Y4K3 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC13.17□□□□□ -0.3
TRAF6Q9Y4K3 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC13.17□□□□□ -0.3
TRAF6Q9Y4K3 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRAF6Q9Y4K3 SRP19-206ENST00000515463 660 ntTSL 3 BASIC13.17□□□□□ -0.3
TRAF6Q9Y4K3 MYOZ3-205ENST00000520112 605 ntTSL 4 BASIC13.17□□□□□ -0.3
TRAF6Q9Y4K3 NAA40-205ENST00000539656 577 ntTSL 4 BASIC13.17□□□□□ -0.3
TRAF6Q9Y4K3 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRAF6Q9Y4K3 MBP-238ENST00000580402 915 ntTSL 5 BASIC13.17□□□□□ -0.3
TRAF6Q9Y4K3 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC13.17□□□□□ -0.3
TRAF6Q9Y4K3 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
TRAF6Q9Y4K3 ITGA3-201ENST00000007722 3665 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
TRAF6Q9Y4K3 ZNF473-203ENST00000445728 2833 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
TRAF6Q9Y4K3 ELP4-203ENST00000395934 1961 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRAF6Q9Y4K3 AC006033.2-201ENST00000609522 1968 ntTSL 2 BASIC13.17□□□□□ -0.3
TRAF6Q9Y4K3 SH3TC1-201ENST00000245105 4226 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
TRAF6Q9Y4K3 HDAC7-202ENST00000354334 4065 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAF6Q9Y4K3 HDAC7-201ENST00000080059 4095 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAF6Q9Y4K3 VWA5B1-201ENST00000289815 4475 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
TRAF6Q9Y4K3 WDR60-202ENST00000407559 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms