Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 ZFP37-203ENST00000555206 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
RIMBP3Q9UFD9 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC20.02■□□□□ 0.8
RIMBP3Q9UFD9 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RIMBP3Q9UFD9 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RIMBP3Q9UFD9 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RIMBP3Q9UFD9 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RIMBP3Q9UFD9 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RIMBP3Q9UFD9 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
RIMBP3Q9UFD9 AC010182.1-201ENST00000548943 2434 ntBASIC20.02■□□□□ 0.79
RIMBP3Q9UFD9 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
RIMBP3Q9UFD9 CEACAM22P-202ENST00000455058 1021 ntBASIC20.02■□□□□ 0.79
RIMBP3Q9UFD9 RPS20-208ENST00000521262 650 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
RIMBP3Q9UFD9 AC105206.2-201ENST00000523556 515 ntTSL 2 BASIC20.02■□□□□ 0.79
RIMBP3Q9UFD9 C17orf62-206ENST00000577436 1079 ntTSL 3 BASIC20.02■□□□□ 0.79
RIMBP3Q9UFD9 AD000671.1-201ENST00000591613 1037 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
RIMBP3Q9UFD9 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
RIMBP3Q9UFD9 AC009061.2-203ENST00000635000 1462 ntTSL 5 BASIC20.01■□□□□ 0.79
RIMBP3Q9UFD9 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RIMBP3Q9UFD9 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RIMBP3Q9UFD9 ZNF493-208ENST00000599461 1769 ntBASIC20.01■□□□□ 0.79
RIMBP3Q9UFD9 AC098934.1-201ENST00000443294 1835 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RIMBP3Q9UFD9 RIPK3-201ENST00000216274 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RIMBP3Q9UFD9 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC20.01■□□□□ 0.79
RIMBP3Q9UFD9 VRK3-205ENST00000593919 1979 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RIMBP3Q9UFD9 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RIMBP3Q9UFD9 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RIMBP3Q9UFD9 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
RIMBP3Q9UFD9 IDO2-202ENST00000389060 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RIMBP3Q9UFD9 OR7E162P-201ENST00000398413 1029 ntBASIC20.01■□□□□ 0.79
RIMBP3Q9UFD9 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC20.01■□□□□ 0.79
RIMBP3Q9UFD9 FES-204ENST00000414248 2327 ntTSL 2 BASIC20.01■□□□□ 0.79
RIMBP3Q9UFD9 AL117350.1-201ENST00000418348 640 ntTSL 2 BASIC20.01■□□□□ 0.79
RIMBP3Q9UFD9 LINC01241-201ENST00000423326 1237 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RIMBP3Q9UFD9 KIF9-204ENST00000425853 740 ntTSL 2 BASIC20.01■□□□□ 0.79
RIMBP3Q9UFD9 NTM-206ENST00000427481 2583 ntTSL 5 BASIC20.01■□□□□ 0.79
RIMBP3Q9UFD9 GSTK1-205ENST00000443571 850 ntTSL 2 BASIC20.01■□□□□ 0.79
RIMBP3Q9UFD9 AL121929.1-201ENST00000457120 524 ntTSL 3 BASIC20.01■□□□□ 0.79
RIMBP3Q9UFD9 AL606534.5-201ENST00000517560 1243 ntBASIC20.01■□□□□ 0.79
RIMBP3Q9UFD9 CYP4F44P-201ENST00000520423 412 ntBASIC20.01■□□□□ 0.79
RIMBP3Q9UFD9 NTM-221ENST00000539799 2550 ntTSL 5 BASIC20.01■□□□□ 0.79
RIMBP3Q9UFD9 GGTA2P-201ENST00000543442 1125 ntBASIC20.01■□□□□ 0.79
RIMBP3Q9UFD9 ANAPC15-216ENST00000545680 872 ntAPPRIS ALT1 TSL 2 BASIC20.01■□□□□ 0.79
RIMBP3Q9UFD9 LINC01588-209ENST00000556019 534 ntTSL 3 BASIC20.01■□□□□ 0.79
RIMBP3Q9UFD9 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
RIMBP3Q9UFD9 Metazoa_SRP.79-201ENST00000610676 290 ntBASIC20.01■□□□□ 0.79
RIMBP3Q9UFD9 pRNA.4-201ENST00000620973 89 ntBASIC20.01■□□□□ 0.79
RIMBP3Q9UFD9 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
RIMBP3Q9UFD9 AL139005.1-201ENST00000623899 1635 ntBASIC20.01■□□□□ 0.79
RIMBP3Q9UFD9 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC20■□□□□ 0.79
RIMBP3Q9UFD9 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC20■□□□□ 0.79
RIMBP3Q9UFD9 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RIMBP3Q9UFD9 GLYR1-212ENST00000591451 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
RIMBP3Q9UFD9 AL591885.1-201ENST00000440494 1799 ntTSL 1 (best) BASIC20■□□□□ 0.79
RIMBP3Q9UFD9 HNRNPA2B1-202ENST00000356674 1711 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
RIMBP3Q9UFD9 IL19-204ENST00000620365 1586 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RIMBP3Q9UFD9 THPO-203ENST00000445696 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
RIMBP3Q9UFD9 TACC1P1-201ENST00000425494 1454 ntBASIC20■□□□□ 0.79
RIMBP3Q9UFD9 CD160-201ENST00000235933 1425 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
RIMBP3Q9UFD9 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RIMBP3Q9UFD9 TNNT2-224ENST00000509001 1330 ntAPPRIS P4 TSL 5 BASIC20■□□□□ 0.79
RIMBP3Q9UFD9 SLAMF9-202ENST00000368093 1156 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
RIMBP3Q9UFD9 Z83851.1-201ENST00000420096 545 ntTSL 4 BASIC20■□□□□ 0.79
RIMBP3Q9UFD9 AL392172.1-205ENST00000435378 768 ntTSL 5 BASIC20■□□□□ 0.79
RIMBP3Q9UFD9 SLC25A5P3-201ENST00000444439 885 ntBASIC20■□□□□ 0.79
RIMBP3Q9UFD9 AC079340.2-202ENST00000504785 448 ntTSL 5 BASIC20■□□□□ 0.79
RIMBP3Q9UFD9 PINX1-203ENST00000519088 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
RIMBP3Q9UFD9 LINC00963-216ENST00000623185 786 ntTSL 5 BASIC20■□□□□ 0.79
RIMBP3Q9UFD9 AC090950.2-201ENST00000624280 660 ntBASIC20■□□□□ 0.79
RIMBP3Q9UFD9 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RIMBP3Q9UFD9 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
RIMBP3Q9UFD9 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC20■□□□□ 0.79
RIMBP3Q9UFD9 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
RIMBP3Q9UFD9 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
RIMBP3Q9UFD9 AL391845.2-201ENST00000443930 1954 ntTSL 2 BASIC20■□□□□ 0.79
RIMBP3Q9UFD9 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RIMBP3Q9UFD9 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RIMBP3Q9UFD9 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC20■□□□□ 0.79
RIMBP3Q9UFD9 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
RIMBP3Q9UFD9 MDH2-203ENST00000432020 1548 ntTSL 2 BASIC19.99■□□□□ 0.79
RIMBP3Q9UFD9 AC023824.1-201ENST00000562945 2975 ntBASIC19.99■□□□□ 0.79
RIMBP3Q9UFD9 AC090643.2-201ENST00000623442 2029 ntBASIC19.99■□□□□ 0.79
RIMBP3Q9UFD9 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RIMBP3Q9UFD9 ZBTB37-202ENST00000367702 1337 ntTSL 5 BASIC19.99■□□□□ 0.79
RIMBP3Q9UFD9 ZNRD1ASP-215ENST00000425604 1986 ntTSL 3 BASIC19.99■□□□□ 0.79
RIMBP3Q9UFD9 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC19.99■□□□□ 0.79
RIMBP3Q9UFD9 DNAL4-202ENST00000406199 631 ntTSL 2 BASIC19.99■□□□□ 0.79
RIMBP3Q9UFD9 CES5AP1-202ENST00000415114 974 ntTSL 5 BASIC19.99■□□□□ 0.79
RIMBP3Q9UFD9 RDH11-202ENST00000428130 1064 ntTSL 2 BASIC19.99■□□□□ 0.79
RIMBP3Q9UFD9 REG1CP-207ENST00000450249 569 ntTSL 4 BASIC19.99■□□□□ 0.79
RIMBP3Q9UFD9 THOC7-204ENST00000469584 836 ntTSL 2 BASIC19.99■□□□□ 0.79
RIMBP3Q9UFD9 LSP1P2-201ENST00000479042 133 ntBASIC19.99■□□□□ 0.79
RIMBP3Q9UFD9 HNRNPH1P3-201ENST00000515565 1225 ntBASIC19.99■□□□□ 0.79
RIMBP3Q9UFD9 AP001360.1-203ENST00000524708 464 ntTSL 3 BASIC19.99■□□□□ 0.79
RIMBP3Q9UFD9 AC109635.2-201ENST00000525654 524 ntTSL 3 BASIC19.99■□□□□ 0.79
RIMBP3Q9UFD9 AC010761.1-201ENST00000582718 899 ntTSL 5 BASIC19.99■□□□□ 0.79
RIMBP3Q9UFD9 CIDEC-208ENST00000618572 1226 ntTSL 5 BASIC19.99■□□□□ 0.79
RIMBP3Q9UFD9 AC025278.3-201ENST00000636139 796 ntBASIC19.99■□□□□ 0.79
RIMBP3Q9UFD9 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
RIMBP3Q9UFD9 EFHC1-219ENST00000636379 1829 ntTSL 5 BASIC19.99■□□□□ 0.79
RIMBP3Q9UFD9 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms