Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 OLAH-203ENST00000378228 1675 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
AP3S1Q92572 CRHR1-206ENST00000398285 2399 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
AP3S1Q92572 INTS8-217ENST00000523731 4633 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
AP3S1Q92572 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
AP3S1Q92572 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
AP3S1Q92572 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
AP3S1Q92572 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
AP3S1Q92572 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
AP3S1Q92572 SERF2-206ENST00000409291 807 ntTSL 3 BASIC11.91□□□□□ -0.5
AP3S1Q92572 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
AP3S1Q92572 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC11.91□□□□□ -0.5
AP3S1Q92572 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
AP3S1Q92572 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
AP3S1Q92572 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
AP3S1Q92572 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
AP3S1Q92572 AC006122.1-201ENST00000493323 440 ntBASIC11.91□□□□□ -0.5
AP3S1Q92572 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
AP3S1Q92572 TMBIM6-227ENST00000552699 2964 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
AP3S1Q92572 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC11.91□□□□□ -0.5
AP3S1Q92572 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
AP3S1Q92572 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC11.91□□□□□ -0.5
AP3S1Q92572 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC11.91□□□□□ -0.5
AP3S1Q92572 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
AP3S1Q92572 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC11.91□□□□□ -0.5
AP3S1Q92572 AC092171.5-201ENST00000608012 942 ntBASIC11.91□□□□□ -0.5
AP3S1Q92572 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC11.91□□□□□ -0.5
AP3S1Q92572 TP53-221ENST00000615910 1149 ntTSL 5 BASIC11.91□□□□□ -0.5
AP3S1Q92572 FGFR1OP-207ENST00000622353 3451 ntTSL 2 BASIC11.91□□□□□ -0.5
AP3S1Q92572 GRIK1-203ENST00000389125 3140 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
AP3S1Q92572 STRA6-204ENST00000423167 2776 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
AP3S1Q92572 ATF4P4-201ENST00000393544 1930 ntBASIC11.91□□□□□ -0.5
AP3S1Q92572 ARHGAP36-202ENST00000370921 2447 ntTSL 2 BASIC11.91□□□□□ -0.5
AP3S1Q92572 MARCH5-201ENST00000358935 3926 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
AP3S1Q92572 TENM3-204ENST00000511685 10896 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
AP3S1Q92572 LIG1-201ENST00000263274 3384 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
AP3S1Q92572 GYG2-204ENST00000381163 3393 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
AP3S1Q92572 LILRA6-203ENST00000396365 1890 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
AP3S1Q92572 TXLNG-202ENST00000398155 3998 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
AP3S1Q92572 EHD1-213ENST00000621096 3336 ntTSL 5 BASIC11.91□□□□□ -0.5
AP3S1Q92572 KRT8P29-201ENST00000420409 1371 ntBASIC11.91□□□□□ -0.5
AP3S1Q92572 ANKRD34A-201ENST00000606888 3613 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
AP3S1Q92572 ZFAT-202ENST00000429442 4421 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
AP3S1Q92572 THSD1-201ENST00000258613 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
AP3S1Q92572 ZNF148-206ENST00000485866 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
AP3S1Q92572 PCDHB7-201ENST00000231137 3765 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
AP3S1Q92572 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC11.91□□□□□ -0.5
AP3S1Q92572 DNMT3A-201ENST00000264709 9501 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
AP3S1Q92572 PEX5-201ENST00000266563 3252 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
AP3S1Q92572 CSAD-201ENST00000267085 2645 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
AP3S1Q92572 PABPC1P2-201ENST00000471997 1805 ntBASIC11.9□□□□□ -0.5
AP3S1Q92572 NR1D1-201ENST00000246672 2772 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
AP3S1Q92572 CHMP5-202ENST00000419016 1957 ntTSL 2 BASIC11.9□□□□□ -0.5
AP3S1Q92572 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
AP3S1Q92572 UBOX5-202ENST00000348031 4469 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
AP3S1Q92572 NFASC-202ENST00000360049 10120 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.5
AP3S1Q92572 NFASC-225ENST00000539706 10135 ntAPPRIS ALT1 TSL 5 BASIC11.9□□□□□ -0.5
AP3S1Q92572 GTF2IP13-202ENST00000609439 10247 ntTSL 5 BASIC11.9□□□□□ -0.5
AP3S1Q92572 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC11.9□□□□□ -0.5
AP3S1Q92572 CLDN19-201ENST00000296387 2859 ntTSL 2 BASIC11.9□□□□□ -0.5
AP3S1Q92572 NPNT-202ENST00000379987 4598 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
AP3S1Q92572 SLC7A9-201ENST00000023064 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
AP3S1Q92572 IRS4-201ENST00000372129 3928 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
AP3S1Q92572 RHOH-221ENST00000615577 2227 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
AP3S1Q92572 RHOH-223ENST00000619474 2230 ntAPPRIS P1 TSL 4 BASIC11.9□□□□□ -0.5
AP3S1Q92572 PSMD5-201ENST00000210313 3443 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
AP3S1Q92572 NLRP2-214ENST00000543010 3576 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
AP3S1Q92572 PLEKHA6-202ENST00000414478 5091 ntTSL 5 BASIC11.9□□□□□ -0.5
AP3S1Q92572 IKZF4-201ENST00000262032 5229 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
AP3S1Q92572 WASF2-202ENST00000618852 5676 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
AP3S1Q92572 HERC2P3-204ENST00000426501 5995 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
AP3S1Q92572 AIMP2-201ENST00000223029 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
AP3S1Q92572 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
AP3S1Q92572 NECTIN2-201ENST00000252483 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
AP3S1Q92572 EPB41L4A-201ENST00000261486 4707 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
AP3S1Q92572 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
AP3S1Q92572 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
AP3S1Q92572 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC11.9□□□□□ -0.5
AP3S1Q92572 HEY2-202ENST00000368365 2461 ntTSL 2 BASIC11.9□□□□□ -0.5
AP3S1Q92572 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
AP3S1Q92572 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
AP3S1Q92572 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
AP3S1Q92572 KRT18P36-201ENST00000411618 1276 ntBASIC11.9□□□□□ -0.5
AP3S1Q92572 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC11.9□□□□□ -0.5
AP3S1Q92572 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC11.9□□□□□ -0.5
AP3S1Q92572 AC055876.3-201ENST00000431496 288 ntBASIC11.9□□□□□ -0.5
AP3S1Q92572 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
AP3S1Q92572 TGOLN2-206ENST00000444342 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
AP3S1Q92572 CHMP1AP1-201ENST00000445563 662 ntBASIC11.9□□□□□ -0.5
AP3S1Q92572 AL355864.2-201ENST00000447420 863 ntBASIC11.9□□□□□ -0.5
AP3S1Q92572 AL365203.1-201ENST00000450890 1048 ntTSL 3 BASIC11.9□□□□□ -0.5
AP3S1Q92572 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC11.9□□□□□ -0.5
AP3S1Q92572 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC11.9□□□□□ -0.5
AP3S1Q92572 AL137779.3-201ENST00000553295 729 ntBASIC11.9□□□□□ -0.5
AP3S1Q92572 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
AP3S1Q92572 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC11.9□□□□□ -0.5
AP3S1Q92572 AC090971.1-201ENST00000559302 510 ntTSL 2 BASIC11.9□□□□□ -0.5
AP3S1Q92572 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC11.9□□□□□ -0.5
AP3S1Q92572 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC11.9□□□□□ -0.5
AP3S1Q92572 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC11.9□□□□□ -0.5
AP3S1Q92572 AC138649.4-201ENST00000612222 287 ntBASIC11.9□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms