Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
LYSMD3Q7Z3D4 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
LYSMD3Q7Z3D4 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC13.62□□□□□ -0.23
LYSMD3Q7Z3D4 IL19-201ENST00000270218 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LYSMD3Q7Z3D4 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LYSMD3Q7Z3D4 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LYSMD3Q7Z3D4 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
LYSMD3Q7Z3D4 DDR1-225ENST00000376568 3894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
LYSMD3Q7Z3D4 TCL1A-201ENST00000402399 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LYSMD3Q7Z3D4 UBTF-209ENST00000529383 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LYSMD3Q7Z3D4 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
LYSMD3Q7Z3D4 LINC00567-201ENST00000569854 3409 ntBASIC13.62□□□□□ -0.23
LYSMD3Q7Z3D4 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
LYSMD3Q7Z3D4 Z82195.2-202ENST00000458525 1646 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LYSMD3Q7Z3D4 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
LYSMD3Q7Z3D4 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC13.62□□□□□ -0.23
LYSMD3Q7Z3D4 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LYSMD3Q7Z3D4 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LYSMD3Q7Z3D4 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
LYSMD3Q7Z3D4 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LYSMD3Q7Z3D4 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LYSMD3Q7Z3D4 AC108734.2-201ENST00000420887 1069 ntBASIC13.62□□□□□ -0.23
LYSMD3Q7Z3D4 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LYSMD3Q7Z3D4 AC103563.1-201ENST00000429316 123 ntBASIC13.62□□□□□ -0.23
LYSMD3Q7Z3D4 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC13.62□□□□□ -0.23
LYSMD3Q7Z3D4 RPL35P9-201ENST00000446059 350 ntBASIC13.62□□□□□ -0.23
LYSMD3Q7Z3D4 GNG10P1-201ENST00000452289 199 ntBASIC13.62□□□□□ -0.23
LYSMD3Q7Z3D4 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC13.62□□□□□ -0.23
LYSMD3Q7Z3D4 OR2A1-AS1-210ENST00000496968 531 ntBASIC13.62□□□□□ -0.23
LYSMD3Q7Z3D4 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
LYSMD3Q7Z3D4 HNRNPLP1-201ENST00000421896 1501 ntBASIC13.62□□□□□ -0.23
LYSMD3Q7Z3D4 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC13.62□□□□□ -0.23
LYSMD3Q7Z3D4 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC13.62□□□□□ -0.23
LYSMD3Q7Z3D4 MEIS2-215ENST00000559561 1442 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
LYSMD3Q7Z3D4 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LYSMD3Q7Z3D4 CICP9-201ENST00000444451 1913 ntBASIC13.62□□□□□ -0.23
LYSMD3Q7Z3D4 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC13.62□□□□□ -0.23
LYSMD3Q7Z3D4 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
LYSMD3Q7Z3D4 FAM13B-203ENST00000425075 3098 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LYSMD3Q7Z3D4 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LYSMD3Q7Z3D4 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC13.62□□□□□ -0.23
LYSMD3Q7Z3D4 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LYSMD3Q7Z3D4 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LYSMD3Q7Z3D4 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LYSMD3Q7Z3D4 MKRN5P-201ENST00000445263 1467 ntBASIC13.61□□□□□ -0.23
LYSMD3Q7Z3D4 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
LYSMD3Q7Z3D4 KIR3DL1-203ENST00000391728 1871 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
LYSMD3Q7Z3D4 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LYSMD3Q7Z3D4 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LYSMD3Q7Z3D4 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC13.61□□□□□ -0.23
LYSMD3Q7Z3D4 GDA-203ENST00000376986 1771 ntTSL 2 BASIC13.61□□□□□ -0.23
LYSMD3Q7Z3D4 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LYSMD3Q7Z3D4 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LYSMD3Q7Z3D4 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LYSMD3Q7Z3D4 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LYSMD3Q7Z3D4 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LYSMD3Q7Z3D4 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LYSMD3Q7Z3D4 SNORD23-201ENST00000408876 110 ntBASIC13.61□□□□□ -0.23
LYSMD3Q7Z3D4 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC13.61□□□□□ -0.23
LYSMD3Q7Z3D4 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC13.61□□□□□ -0.23
LYSMD3Q7Z3D4 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC13.61□□□□□ -0.23
LYSMD3Q7Z3D4 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC13.61□□□□□ -0.23
LYSMD3Q7Z3D4 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
LYSMD3Q7Z3D4 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
LYSMD3Q7Z3D4 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LYSMD3Q7Z3D4 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC13.61□□□□□ -0.23
LYSMD3Q7Z3D4 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC13.61□□□□□ -0.23
LYSMD3Q7Z3D4 TMEM14EP-202ENST00000639378 1296 ntBASIC13.61□□□□□ -0.23
LYSMD3Q7Z3D4 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LYSMD3Q7Z3D4 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LYSMD3Q7Z3D4 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LYSMD3Q7Z3D4 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LYSMD3Q7Z3D4 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
LYSMD3Q7Z3D4 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LYSMD3Q7Z3D4 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
LYSMD3Q7Z3D4 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
LYSMD3Q7Z3D4 C12orf66-201ENST00000311915 2698 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LYSMD3Q7Z3D4 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
LYSMD3Q7Z3D4 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC13.61□□□□□ -0.23
LYSMD3Q7Z3D4 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LYSMD3Q7Z3D4 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LYSMD3Q7Z3D4 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LYSMD3Q7Z3D4 MEG8-221ENST00000636391 2155 ntTSL 5 BASIC13.61□□□□□ -0.23
LYSMD3Q7Z3D4 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LYSMD3Q7Z3D4 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
LYSMD3Q7Z3D4 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC13.61□□□□□ -0.23
LYSMD3Q7Z3D4 SLC7A9-201ENST00000023064 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LYSMD3Q7Z3D4 GOLGA8N-205ENST00000569659 1791 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
LYSMD3Q7Z3D4 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LYSMD3Q7Z3D4 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC13.6□□□□□ -0.23
LYSMD3Q7Z3D4 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LYSMD3Q7Z3D4 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC13.6□□□□□ -0.23
LYSMD3Q7Z3D4 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LYSMD3Q7Z3D4 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC13.6□□□□□ -0.23
LYSMD3Q7Z3D4 FUCA1P1-201ENST00000374476 1351 ntBASIC13.6□□□□□ -0.23
LYSMD3Q7Z3D4 DRD3-201ENST00000295881 1541 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
LYSMD3Q7Z3D4 MCF2L-209ENST00000397036 1544 ntTSL 2 BASIC13.6□□□□□ -0.23
LYSMD3Q7Z3D4 AC021305.1-201ENST00000520656 1514 ntBASIC13.6□□□□□ -0.23
LYSMD3Q7Z3D4 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
LYSMD3Q7Z3D4 ALDOA-213ENST00000564595 1663 ntTSL 2 BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms