Protein–RNA interactions for Protein: Q2M3C7

SPHKAP, A-kinase anchor protein SPHKAP, humanhuman

Predictions only

Length 1,700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHKAPQ2M3C7 LINC01623-201ENST00000440244 2458 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SPHKAPQ2M3C7 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SPHKAPQ2M3C7 LINC02125-201ENST00000512279 2198 ntTSL 2 BASIC18.62■□□□□ 0.57
SPHKAPQ2M3C7 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC18.62■□□□□ 0.57
SPHKAPQ2M3C7 AL137077.2-201ENST00000635124 1608 ntBASIC18.62■□□□□ 0.57
SPHKAPQ2M3C7 ARHGEF9-235ENST00000637723 2146 ntTSL 5 BASIC18.62■□□□□ 0.57
SPHKAPQ2M3C7 TRMT2B-202ENST00000372936 3327 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
SPHKAPQ2M3C7 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
SPHKAPQ2M3C7 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SPHKAPQ2M3C7 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC18.62■□□□□ 0.57
SPHKAPQ2M3C7 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
SPHKAPQ2M3C7 AC107375.1-201ENST00000564464 2231 ntBASIC18.62■□□□□ 0.57
SPHKAPQ2M3C7 AC244197.2-201ENST00000370438 655 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SPHKAPQ2M3C7 TGFA-207ENST00000450929 950 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SPHKAPQ2M3C7 OARD1-214ENST00000486443 764 ntTSL 3 BASIC18.62■□□□□ 0.57
SPHKAPQ2M3C7 AP003785.1-201ENST00000544959 492 ntTSL 4 BASIC18.62■□□□□ 0.57
SPHKAPQ2M3C7 AC120498.5-201ENST00000561757 299 ntBASIC18.62■□□□□ 0.57
SPHKAPQ2M3C7 AD000091.1-201ENST00000592379 287 ntBASIC18.62■□□□□ 0.57
SPHKAPQ2M3C7 AC008555.6-201ENST00000605047 458 ntTSL 2 BASIC18.62■□□□□ 0.57
SPHKAPQ2M3C7 SRP19-208ENST00000621420 1270 ntTSL 3 BASIC18.62■□□□□ 0.57
SPHKAPQ2M3C7 RBM10-206ENST00000628161 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SPHKAPQ2M3C7 IGF2BP2-203ENST00000421047 1711 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SPHKAPQ2M3C7 AOX3P-202ENST00000469595 1471 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SPHKAPQ2M3C7 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SPHKAPQ2M3C7 AC105415.1-201ENST00000509015 1416 ntTSL 2 BASIC18.62■□□□□ 0.57
SPHKAPQ2M3C7 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
SPHKAPQ2M3C7 RABL2A-207ENST00000409875 2282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SPHKAPQ2M3C7 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SPHKAPQ2M3C7 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SPHKAPQ2M3C7 FMR1-220ENST00000621987 1352 ntTSL 5 BASIC18.61■□□□□ 0.57
SPHKAPQ2M3C7 FDFT1-218ENST00000530664 1761 ntTSL 2 BASIC18.61■□□□□ 0.57
SPHKAPQ2M3C7 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SPHKAPQ2M3C7 AC073585.1-201ENST00000368895 1328 ntBASIC18.61■□□□□ 0.57
SPHKAPQ2M3C7 RAB8A-202ENST00000586682 1315 ntTSL 2 BASIC18.61■□□□□ 0.57
SPHKAPQ2M3C7 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SPHKAPQ2M3C7 C3orf56-201ENST00000624688 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SPHKAPQ2M3C7 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
SPHKAPQ2M3C7 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SPHKAPQ2M3C7 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SPHKAPQ2M3C7 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SPHKAPQ2M3C7 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC18.61■□□□□ 0.57
SPHKAPQ2M3C7 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC18.61■□□□□ 0.57
SPHKAPQ2M3C7 LYRM1-202ENST00000396052 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SPHKAPQ2M3C7 OR6F1-203ENST00000641444 1698 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
SPHKAPQ2M3C7 MSRA-202ENST00000382490 1460 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SPHKAPQ2M3C7 LMO7DN-201ENST00000318245 1167 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
SPHKAPQ2M3C7 GNRH2-203ENST00000380346 353 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
SPHKAPQ2M3C7 AC004884.1-201ENST00000393647 319 ntBASIC18.61■□□□□ 0.57
SPHKAPQ2M3C7 PHBP11-201ENST00000420550 809 ntBASIC18.61■□□□□ 0.57
SPHKAPQ2M3C7 IQCF5-201ENST00000446461 512 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
SPHKAPQ2M3C7 TAC3-209ENST00000458521 816 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SPHKAPQ2M3C7 AC079340.2-201ENST00000504957 495 ntTSL 2 BASIC18.61■□□□□ 0.57
SPHKAPQ2M3C7 TMEM253-206ENST00000556585 1236 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
SPHKAPQ2M3C7 Metazoa_SRP.210-201ENST00000637921 244 ntBASIC18.61■□□□□ 0.57
SPHKAPQ2M3C7 ZKSCAN1-202ENST00000426572 2011 ntTSL 2 BASIC18.61■□□□□ 0.57
SPHKAPQ2M3C7 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SPHKAPQ2M3C7 TRMT61B-201ENST00000306108 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SPHKAPQ2M3C7 FOSB-203ENST00000443841 3346 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SPHKAPQ2M3C7 RGPD4-AS1-202ENST00000457647 1792 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SPHKAPQ2M3C7 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SPHKAPQ2M3C7 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SPHKAPQ2M3C7 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SPHKAPQ2M3C7 ZFYVE19-209ENST00000564258 2059 ntTSL 2 BASIC18.61■□□□□ 0.57
SPHKAPQ2M3C7 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SPHKAPQ2M3C7 PPP1R8-201ENST00000236412 2414 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SPHKAPQ2M3C7 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SPHKAPQ2M3C7 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
SPHKAPQ2M3C7 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SPHKAPQ2M3C7 LMX1A-203ENST00000367893 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SPHKAPQ2M3C7 AL807752.1-201ENST00000395082 1322 ntBASIC18.61■□□□□ 0.57
SPHKAPQ2M3C7 XBP1-204ENST00000405219 1690 ntTSL 2 BASIC18.61■□□□□ 0.57
SPHKAPQ2M3C7 CENPK-215ENST00000514814 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SPHKAPQ2M3C7 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
SPHKAPQ2M3C7 AC126564.1-201ENST00000623628 2013 ntBASIC18.61■□□□□ 0.57
SPHKAPQ2M3C7 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC18.61■□□□□ 0.57
SPHKAPQ2M3C7 VAMP7-201ENST00000262640 2496 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SPHKAPQ2M3C7 CAV2-202ENST00000343213 776 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SPHKAPQ2M3C7 OR2T27-201ENST00000344889 954 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
SPHKAPQ2M3C7 SLC2A11-208ENST00000405847 730 ntTSL 2 BASIC18.6■□□□□ 0.57
SPHKAPQ2M3C7 GALM-202ENST00000410063 1023 ntTSL 3 BASIC18.6■□□□□ 0.57
SPHKAPQ2M3C7 AL357833.1-201ENST00000413993 832 ntTSL 3 BASIC18.6■□□□□ 0.57
SPHKAPQ2M3C7 CYP4F60P-201ENST00000439449 549 ntBASIC18.6■□□□□ 0.57
SPHKAPQ2M3C7 AC012513.2-201ENST00000441511 1137 ntBASIC18.6■□□□□ 0.57
SPHKAPQ2M3C7 AL354733.3-201ENST00000448389 390 ntTSL 3 BASIC18.6■□□□□ 0.57
SPHKAPQ2M3C7 KCTD14-202ENST00000533144 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SPHKAPQ2M3C7 SNAPC5-207ENST00000566658 574 ntAPPRIS ALT2 TSL 4 BASIC18.6■□□□□ 0.57
SPHKAPQ2M3C7 AC103810.4-201ENST00000578601 257 ntBASIC18.6■□□□□ 0.57
SPHKAPQ2M3C7 MIR378I-201ENST00000582688 76 ntBASIC18.6■□□□□ 0.57
SPHKAPQ2M3C7 SNRPD2-203ENST00000585392 379 ntTSL 3 BASIC18.6■□□□□ 0.57
SPHKAPQ2M3C7 FAM69A-204ENST00000615519 865 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SPHKAPQ2M3C7 LINC02348-201ENST00000618724 489 ntTSL 4 BASIC18.6■□□□□ 0.57
SPHKAPQ2M3C7 AL109618.3-201ENST00000622748 430 ntBASIC18.6■□□□□ 0.57
SPHKAPQ2M3C7 GRIA4-210ENST00000527669 2647 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SPHKAPQ2M3C7 IL1RN-204ENST00000409052 1903 ntTSL 5 BASIC18.6■□□□□ 0.57
SPHKAPQ2M3C7 AC115284.2-201ENST00000624646 2054 ntBASIC18.6■□□□□ 0.57
SPHKAPQ2M3C7 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
SPHKAPQ2M3C7 RHOH-222ENST00000617441 1872 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
SPHKAPQ2M3C7 TRNT1-202ENST00000280591 2180 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SPHKAPQ2M3C7 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SPHKAPQ2M3C7 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms