Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 AF013593.1-201ENST00000458074 1487 ntBASIC12.44□□□□□ -0.42
RFC3P40938 AC245140.2-201ENST00000624054 1939 ntBASIC12.44□□□□□ -0.42
RFC3P40938 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
RFC3P40938 ZNF384-204ENST00000396801 3008 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
RFC3P40938 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC12.44□□□□□ -0.42
RFC3P40938 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RFC3P40938 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC12.44□□□□□ -0.42
RFC3P40938 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
RFC3P40938 SALL4P6-201ENST00000429385 1691 ntBASIC12.44□□□□□ -0.42
RFC3P40938 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC12.44□□□□□ -0.42
RFC3P40938 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
RFC3P40938 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
RFC3P40938 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC12.44□□□□□ -0.42
RFC3P40938 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC12.44□□□□□ -0.42
RFC3P40938 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RFC3P40938 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC12.44□□□□□ -0.42
RFC3P40938 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RFC3P40938 MKL1-213ENST00000620651 3757 ntTSL 5 BASIC12.44□□□□□ -0.42
RFC3P40938 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
RFC3P40938 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
RFC3P40938 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RFC3P40938 ARHGAP21-217ENST00000612832 5514 ntTSL 5 BASIC12.43□□□□□ -0.42
RFC3P40938 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC12.43□□□□□ -0.42
RFC3P40938 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC12.43□□□□□ -0.42
RFC3P40938 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RFC3P40938 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
RFC3P40938 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RFC3P40938 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RFC3P40938 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
RFC3P40938 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
RFC3P40938 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RFC3P40938 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RFC3P40938 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RFC3P40938 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RFC3P40938 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC12.43□□□□□ -0.42
RFC3P40938 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RFC3P40938 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RFC3P40938 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RFC3P40938 COX20P1-201ENST00000366529 357 ntBASIC12.43□□□□□ -0.42
RFC3P40938 MIR566-201ENST00000385187 94 ntBASIC12.43□□□□□ -0.42
RFC3P40938 MIR1301-201ENST00000408518 82 ntBASIC12.43□□□□□ -0.42
RFC3P40938 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC12.43□□□□□ -0.42
RFC3P40938 RPL15-205ENST00000415719 830 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
RFC3P40938 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC12.43□□□□□ -0.42
RFC3P40938 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC12.43□□□□□ -0.42
RFC3P40938 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC12.43□□□□□ -0.42
RFC3P40938 APOPT1-215ENST00000556253 783 ntTSL 3 BASIC12.43□□□□□ -0.42
RFC3P40938 SCAMP5-216ENST00000568081 710 ntTSL 2 BASIC12.43□□□□□ -0.42
RFC3P40938 AP005212.2-201ENST00000584979 510 ntBASIC12.43□□□□□ -0.42
RFC3P40938 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC12.43□□□□□ -0.42
RFC3P40938 AC005777.1-201ENST00000588332 187 ntBASIC12.43□□□□□ -0.42
RFC3P40938 CSTP2-201ENST00000610599 398 ntBASIC12.43□□□□□ -0.42
RFC3P40938 AC139713.2-207ENST00000641556 1292 ntBASIC12.43□□□□□ -0.42
RFC3P40938 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC12.43□□□□□ -0.42
RFC3P40938 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RFC3P40938 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RFC3P40938 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RFC3P40938 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RFC3P40938 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
RFC3P40938 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
RFC3P40938 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
RFC3P40938 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
RFC3P40938 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RFC3P40938 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RFC3P40938 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC12.43□□□□□ -0.42
RFC3P40938 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
RFC3P40938 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC12.43□□□□□ -0.42
RFC3P40938 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RFC3P40938 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RFC3P40938 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
RFC3P40938 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
RFC3P40938 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RFC3P40938 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
RFC3P40938 SLC38A5-210ENST00000595796 2659 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RFC3P40938 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RFC3P40938 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC12.43□□□□□ -0.42
RFC3P40938 EGLN3-205ENST00000547327 2849 ntBASIC12.43□□□□□ -0.42
RFC3P40938 MIR193BHG-211ENST00000641433 5365 ntBASIC12.43□□□□□ -0.42
RFC3P40938 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RFC3P40938 TPPP3-205ENST00000564104 1736 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RFC3P40938 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RFC3P40938 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RFC3P40938 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC12.42□□□□□ -0.42
RFC3P40938 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC12.42□□□□□ -0.42
RFC3P40938 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
RFC3P40938 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RFC3P40938 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC12.42□□□□□ -0.42
RFC3P40938 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
RFC3P40938 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC12.42□□□□□ -0.42
RFC3P40938 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RFC3P40938 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC12.42□□□□□ -0.42
RFC3P40938 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
RFC3P40938 NOX5-202ENST00000388866 2804 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RFC3P40938 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC12.42□□□□□ -0.42
RFC3P40938 C11orf53-201ENST00000280325 1208 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
RFC3P40938 AC022080.1-201ENST00000366255 781 ntBASIC12.42□□□□□ -0.42
RFC3P40938 GEMIN8P4-201ENST00000380526 729 ntBASIC12.42□□□□□ -0.42
RFC3P40938 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RFC3P40938 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RFC3P40938 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms