Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 MCPH1-207ENST00000522905 2049 ntTSL 2 BASIC15.42■□□□□ 0.06
CLCN1P35523 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
CLCN1P35523 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLCN1P35523 ENOX2-201ENST00000338144 4263 ntTSL 2 BASIC15.42■□□□□ 0.06
CLCN1P35523 DHX16-201ENST00000376437 1933 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CLCN1P35523 HHIPL2-201ENST00000343410 2575 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLCN1P35523 CELF2-AS1-201ENST00000379256 2468 ntTSL 2 BASIC15.42■□□□□ 0.06
CLCN1P35523 YWHAB-202ENST00000372839 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLCN1P35523 FURIN-201ENST00000268171 4244 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLCN1P35523 RTN1-203ENST00000395090 1609 ntTSL 2 BASIC15.42■□□□□ 0.06
CLCN1P35523 RASAL1-201ENST00000261729 3382 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLCN1P35523 CORO7-202ENST00000537233 3392 ntTSL 2 BASIC15.42■□□□□ 0.06
CLCN1P35523 SYBU-222ENST00000529175 2717 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CLCN1P35523 USP30-201ENST00000257548 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLCN1P35523 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLCN1P35523 KCNMA1-241ENST00000638606 3852 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
CLCN1P35523 KCNMA1-279ENST00000640182 3852 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
CLCN1P35523 GDA-203ENST00000376986 1771 ntTSL 2 BASIC15.41■□□□□ 0.06
CLCN1P35523 PCSK2-202ENST00000377899 4674 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CLCN1P35523 TMEM220-201ENST00000341871 3106 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLCN1P35523 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CLCN1P35523 CARF-213ENST00000438828 3574 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLCN1P35523 ADM2-202ENST00000395738 4276 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLCN1P35523 RBM25-204ENST00000526754 1567 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CLCN1P35523 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLCN1P35523 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLCN1P35523 SLC18A1-204ENST00000437980 2822 ntTSL 5 BASIC15.41■□□□□ 0.06
CLCN1P35523 ZNF501-201ENST00000396048 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLCN1P35523 KIR3DL1-201ENST00000326542 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLCN1P35523 LOXHD1-204ENST00000398705 1824 ntTSL 2 BASIC15.41■□□□□ 0.06
CLCN1P35523 PPP6R2-209ENST00000612753 4104 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
CLCN1P35523 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLCN1P35523 OR8S1-201ENST00000310194 1080 ntBASIC15.41■□□□□ 0.06
CLCN1P35523 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLCN1P35523 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLCN1P35523 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CLCN1P35523 KRT18P36-201ENST00000411618 1276 ntBASIC15.41■□□□□ 0.06
CLCN1P35523 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC15.41■□□□□ 0.06
CLCN1P35523 MTX1P1-201ENST00000440904 838 ntBASIC15.41■□□□□ 0.06
CLCN1P35523 GOLGA2P4-201ENST00000441462 777 ntBASIC15.41■□□□□ 0.06
CLCN1P35523 RPL13AP20-201ENST00000459725 609 ntBASIC15.41■□□□□ 0.06
CLCN1P35523 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC15.41■□□□□ 0.06
CLCN1P35523 USB1-203ENST00000539737 1212 ntTSL 2 BASIC15.41■□□□□ 0.06
CLCN1P35523 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC15.41■□□□□ 0.06
CLCN1P35523 AL583810.1-201ENST00000553344 1045 ntBASIC15.41■□□□□ 0.06
CLCN1P35523 RN7SL560P-201ENST00000577943 264 ntBASIC15.41■□□□□ 0.06
CLCN1P35523 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
CLCN1P35523 KLK3-211ENST00000597483 810 ntTSL 2 BASIC15.41■□□□□ 0.06
CLCN1P35523 AC021016.3-201ENST00000608367 477 ntBASIC15.41■□□□□ 0.06
CLCN1P35523 AL096828.3-201ENST00000615354 462 ntBASIC15.41■□□□□ 0.06
CLCN1P35523 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC15.41■□□□□ 0.06
CLCN1P35523 GOLGA6L2-202ENST00000345070 1972 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
CLCN1P35523 AC005865.1-201ENST00000432994 3004 ntTSL 2 BASIC15.41■□□□□ 0.06
CLCN1P35523 PITX2-202ENST00000354925 3359 ntAPPRIS ALT1 TSL 2 BASIC15.41■□□□□ 0.06
CLCN1P35523 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC15.41■□□□□ 0.06
CLCN1P35523 RBM15-201ENST00000369784 4244 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CLCN1P35523 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CLCN1P35523 SLC4A11-207ENST00000539553 2832 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
CLCN1P35523 CICP7-201ENST00000432723 2477 ntBASIC15.41■□□□□ 0.06
CLCN1P35523 CYTH1-210ENST00000589297 3756 ntTSL 5 BASIC15.41■□□□□ 0.06
CLCN1P35523 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLCN1P35523 ZFYVE19-202ENST00000336455 1784 ntTSL 2 BASIC15.41■□□□□ 0.06
CLCN1P35523 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLCN1P35523 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC15.41■□□□□ 0.06
CLCN1P35523 INTS6L-206ENST00000639893 3904 ntTSL 5 BASIC15.41■□□□□ 0.06
CLCN1P35523 PTK7-204ENST00000349241 3801 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CLCN1P35523 NLRP7-206ENST00000588756 3826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLCN1P35523 GABRR2-201ENST00000402938 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLCN1P35523 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC15.41■□□□□ 0.06
CLCN1P35523 ZNF169-204ENST00000481550 1696 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CLCN1P35523 LINC02052-202ENST00000427914 2285 ntTSL 2 BASIC15.41■□□□□ 0.06
CLCN1P35523 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC15.41■□□□□ 0.06
CLCN1P35523 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLCN1P35523 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLCN1P35523 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
CLCN1P35523 ZCRB1-201ENST00000266529 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLCN1P35523 LDLR-205ENST00000557933 2941 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
CLCN1P35523 AL031714.1-201ENST00000567829 2926 ntTSL 5 BASIC15.4■□□□□ 0.06
CLCN1P35523 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CLCN1P35523 PLEKHG5-205ENST00000377740 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLCN1P35523 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLCN1P35523 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CLCN1P35523 C12orf74-201ENST00000397833 1856 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLCN1P35523 PML-207ENST00000435786 3643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLCN1P35523 LIN28B-203ENST00000637759 2635 ntTSL 5 BASIC15.4■□□□□ 0.06
CLCN1P35523 BX537318.2-201ENST00000624893 4162 ntBASIC15.4■□□□□ 0.06
CLCN1P35523 FBXO5-201ENST00000229758 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLCN1P35523 ZFP69B-201ENST00000361584 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLCN1P35523 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CLCN1P35523 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CLCN1P35523 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CLCN1P35523 SMS-201ENST00000379404 1174 ntTSL 3 BASIC15.4■□□□□ 0.06
CLCN1P35523 NDUFAB1P1-201ENST00000404262 460 ntBASIC15.4■□□□□ 0.06
CLCN1P35523 MIR663B-201ENST00000408361 115 ntBASIC15.4■□□□□ 0.06
CLCN1P35523 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC15.4■□□□□ 0.06
CLCN1P35523 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC15.4■□□□□ 0.06
CLCN1P35523 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC15.4■□□□□ 0.06
CLCN1P35523 VDAC1P1-201ENST00000439229 848 ntBASIC15.4■□□□□ 0.06
CLCN1P35523 OAZ3-203ENST00000453029 729 ntTSL 5 BASIC15.4■□□□□ 0.06
CLCN1P35523 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms