Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 SETD3-204ENST00000436070 2592 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TPM3P06753 AOC2-202ENST00000452774 2572 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TPM3P06753 GPR179-204ENST00000621958 7983 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
TPM3P06753 RBM10-206ENST00000628161 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TPM3P06753 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TPM3P06753 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC15.21■□□□□ 0.03
TPM3P06753 BOLA2P3-201ENST00000404566 256 ntBASIC15.21■□□□□ 0.03
TPM3P06753 CTCFL-204ENST00000422869 2966 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TPM3P06753 AC078875.1-201ENST00000431907 724 ntBASIC15.21■□□□□ 0.03
TPM3P06753 VDAC1P1-201ENST00000439229 848 ntBASIC15.21■□□□□ 0.03
TPM3P06753 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
TPM3P06753 RN7SL692P-201ENST00000464677 288 ntBASIC15.21■□□□□ 0.03
TPM3P06753 RPL18P13-201ENST00000478088 569 ntBASIC15.21■□□□□ 0.03
TPM3P06753 AC106794.1-201ENST00000506935 792 ntBASIC15.21■□□□□ 0.03
TPM3P06753 SRP19-206ENST00000515463 660 ntTSL 3 BASIC15.21■□□□□ 0.03
TPM3P06753 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TPM3P06753 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC15.21■□□□□ 0.03
TPM3P06753 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC15.21■□□□□ 0.03
TPM3P06753 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC15.21■□□□□ 0.03
TPM3P06753 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC15.21■□□□□ 0.03
TPM3P06753 AC093752.3-201ENST00000567343 901 ntBASIC15.21■□□□□ 0.03
TPM3P06753 DNAH2-202ENST00000570791 2994 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TPM3P06753 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
TPM3P06753 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC15.21■□□□□ 0.03
TPM3P06753 AL023803.2-201ENST00000620080 638 ntBASIC15.21■□□□□ 0.03
TPM3P06753 TBC1D3F-201ENST00000620210 2117 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
TPM3P06753 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC15.21■□□□□ 0.03
TPM3P06753 RAB8B-201ENST00000321437 4943 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TPM3P06753 EXOC5-202ENST00000413566 8513 ntTSL 5 BASIC15.21■□□□□ 0.03
TPM3P06753 ARL8B-202ENST00000419534 1684 ntTSL 2 BASIC15.21■□□□□ 0.03
TPM3P06753 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC15.21■□□□□ 0.03
TPM3P06753 AC040160.2-201ENST00000623816 1675 ntBASIC15.21■□□□□ 0.03
TPM3P06753 SNX14-201ENST00000314673 3486 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
TPM3P06753 FAM153C-201ENST00000398106 1510 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
TPM3P06753 KDM7A-201ENST00000397560 9272 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
TPM3P06753 RNF170-206ENST00000527424 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TPM3P06753 AC010536.1-201ENST00000538868 2611 ntBASIC15.21■□□□□ 0.03
TPM3P06753 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC15.21■□□□□ 0.02
TPM3P06753 TMEM123-202ENST00000398136 3579 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
TPM3P06753 AC134772.2-202ENST00000634384 3585 ntTSL 2 BASIC15.21■□□□□ 0.02
TPM3P06753 TMX1-201ENST00000457354 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TPM3P06753 SHMT2-205ENST00000553474 1765 ntTSL 2 BASIC15.21■□□□□ 0.02
TPM3P06753 DNM3-208ENST00000627582 7625 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TPM3P06753 GLP1R-201ENST00000373256 3105 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TPM3P06753 AC105402.3-202ENST00000446781 2592 ntTSL 5 BASIC15.21■□□□□ 0.02
TPM3P06753 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TPM3P06753 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TPM3P06753 MAP1S-202ENST00000544059 3399 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.02
TPM3P06753 TXNDC2-202ENST00000357775 2830 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
TPM3P06753 DAND5-201ENST00000317060 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TPM3P06753 SELPLG-203ENST00000550948 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
TPM3P06753 SP140L-203ENST00000415673 2665 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
TPM3P06753 AC004834.1-202ENST00000638785 1737 ntTSL 5 BASIC15.2■□□□□ 0.02
TPM3P06753 ZNF667-201ENST00000292069 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TPM3P06753 GNG4-204ENST00000450593 4978 ntAPPRIS P1 TSL 4 BASIC15.2■□□□□ 0.02
TPM3P06753 AQP7-205ENST00000379507 2879 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
TPM3P06753 ARHGAP24-203ENST00000395184 4661 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
TPM3P06753 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
TPM3P06753 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TPM3P06753 CU639417.3-201ENST00000624240 1404 ntBASIC15.2■□□□□ 0.02
TPM3P06753 FGFRL1-202ENST00000398484 3639 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
TPM3P06753 FAM184A-211ENST00000521531 3244 ntTSL 5 BASIC15.2■□□□□ 0.02
TPM3P06753 SHC1-210ENST00000448116 3481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TPM3P06753 HNF1A-208ENST00000541395 3332 ntTSL 2 BASIC15.2■□□□□ 0.02
TPM3P06753 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TPM3P06753 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TPM3P06753 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TPM3P06753 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC15.2■□□□□ 0.02
TPM3P06753 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC15.2■□□□□ 0.02
TPM3P06753 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC15.2■□□□□ 0.02
TPM3P06753 SLC25A15P3-201ENST00000505530 290 ntBASIC15.2■□□□□ 0.02
TPM3P06753 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC15.2■□□□□ 0.02
TPM3P06753 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TPM3P06753 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC15.2■□□□□ 0.02
TPM3P06753 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC15.2■□□□□ 0.02
TPM3P06753 AC005324.6-201ENST00000587972 613 ntBASIC15.2■□□□□ 0.02
TPM3P06753 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
TPM3P06753 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC15.2■□□□□ 0.02
TPM3P06753 PLOD2-209ENST00000494950 2908 ntTSL 2 BASIC15.2■□□□□ 0.02
TPM3P06753 HNRNPLP1-201ENST00000421896 1501 ntBASIC15.2■□□□□ 0.02
TPM3P06753 FAM198B-207ENST00000592057 3425 ntTSL 2 BASIC15.2■□□□□ 0.02
TPM3P06753 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TPM3P06753 SPAG8-201ENST00000340291 1759 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
TPM3P06753 COBLL1-202ENST00000375458 9367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TPM3P06753 ERN2-201ENST00000256797 3549 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
TPM3P06753 SERPINA1-205ENST00000404814 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TPM3P06753 KRT8P29-201ENST00000420409 1371 ntBASIC15.2■□□□□ 0.02
TPM3P06753 AC002550.1-201ENST00000565916 1379 ntTSL 5 BASIC15.2■□□□□ 0.02
TPM3P06753 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TPM3P06753 ATP13A2-203ENST00000452699 3981 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TPM3P06753 HERC6-202ENST00000273960 3473 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TPM3P06753 CHST15-201ENST00000346248 4810 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TPM3P06753 NCBP2L-202ENST00000639756 1953 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
TPM3P06753 RCC2P5-201ENST00000492126 1487 ntBASIC15.2■□□□□ 0.02
TPM3P06753 RAN-210ENST00000541630 1475 ntTSL 2 BASIC15.2■□□□□ 0.02
TPM3P06753 GRM4-209ENST00000609222 3176 ntTSL 2 BASIC15.2■□□□□ 0.02
TPM3P06753 LINC00662-206ENST00000590523 2053 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TPM3P06753 COL19A1-205ENST00000620364 6233 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TPM3P06753 GLYR1-212ENST00000591451 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TPM3P06753 PTPRN-202ENST00000409251 3622 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms