Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
KDELR3O43731 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
KDELR3O43731 TCAF1P1-201ENST00000414990 2232 ntBASIC13.64□□□□□ -0.23
KDELR3O43731 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
KDELR3O43731 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC13.64□□□□□ -0.23
KDELR3O43731 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
KDELR3O43731 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
KDELR3O43731 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC13.64□□□□□ -0.23
KDELR3O43731 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
KDELR3O43731 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
KDELR3O43731 CCDC163-203ENST00000626657 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
KDELR3O43731 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
KDELR3O43731 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC13.64□□□□□ -0.23
KDELR3O43731 VOPP1-217ENST00000625836 1400 ntTSL 2 BASIC13.64□□□□□ -0.23
KDELR3O43731 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
KDELR3O43731 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
KDELR3O43731 ATP6V1B1-201ENST00000234396 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
KDELR3O43731 PIGG-205ENST00000503111 2629 ntTSL 2 BASIC13.63□□□□□ -0.23
KDELR3O43731 GK-203ENST00000378943 3707 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
KDELR3O43731 XBP1-204ENST00000405219 1690 ntTSL 2 BASIC13.63□□□□□ -0.23
KDELR3O43731 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC13.63□□□□□ -0.23
KDELR3O43731 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
KDELR3O43731 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
KDELR3O43731 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
KDELR3O43731 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
KDELR3O43731 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
KDELR3O43731 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
KDELR3O43731 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
KDELR3O43731 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
KDELR3O43731 TUBB8P5-201ENST00000445286 1351 ntBASIC13.63□□□□□ -0.23
KDELR3O43731 PDHB-210ENST00000485460 1397 ntTSL 2 BASIC13.63□□□□□ -0.23
KDELR3O43731 CLASP2-218ENST00000487200 1940 ntTSL 2 BASIC13.63□□□□□ -0.23
KDELR3O43731 PCDHB19P-202ENST00000625133 2914 ntBASIC13.63□□□□□ -0.23
KDELR3O43731 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
KDELR3O43731 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
KDELR3O43731 RN7SKP255-201ENST00000363442 313 ntBASIC13.63□□□□□ -0.23
KDELR3O43731 RN7SKP203-201ENST00000363618 332 ntBASIC13.63□□□□□ -0.23
KDELR3O43731 RN7SKP71-201ENST00000364558 318 ntBASIC13.63□□□□□ -0.23
KDELR3O43731 7SK.1-201ENST00000365328 331 ntBASIC13.63□□□□□ -0.23
KDELR3O43731 ACOT6-201ENST00000381139 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
KDELR3O43731 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
KDELR3O43731 AL513165.1-201ENST00000413915 289 ntTSL 3 BASIC13.63□□□□□ -0.23
KDELR3O43731 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC13.63□□□□□ -0.23
KDELR3O43731 PRR34-AS1-203ENST00000451166 877 ntTSL 3 BASIC13.63□□□□□ -0.23
KDELR3O43731 AL357140.1-201ENST00000454104 424 ntTSL 2 BASIC13.63□□□□□ -0.23
KDELR3O43731 SNORA47-201ENST00000458862 138 ntBASIC13.63□□□□□ -0.23
KDELR3O43731 DNM1P51-201ENST00000558149 522 ntBASIC13.63□□□□□ -0.23
KDELR3O43731 LINC01836-201ENST00000586061 829 ntTSL 3 BASIC13.63□□□□□ -0.23
KDELR3O43731 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC13.63□□□□□ -0.23
KDELR3O43731 RARS-210ENST00000626454 177 ntTSL 5 BASIC13.63□□□□□ -0.23
KDELR3O43731 VMP1-201ENST00000262291 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
KDELR3O43731 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC13.63□□□□□ -0.23
KDELR3O43731 NAMA-207ENST00000605707 1748 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
KDELR3O43731 AS3MT-202ENST00000615257 1723 ntTSL 5 BASIC13.63□□□□□ -0.23
KDELR3O43731 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
KDELR3O43731 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
KDELR3O43731 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
KDELR3O43731 AKNA-203ENST00000312033 3334 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
KDELR3O43731 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
KDELR3O43731 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
KDELR3O43731 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
KDELR3O43731 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC13.63□□□□□ -0.23
KDELR3O43731 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
KDELR3O43731 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
KDELR3O43731 KRT8P38-201ENST00000441370 1430 ntBASIC13.63□□□□□ -0.23
KDELR3O43731 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
KDELR3O43731 TUBB8P7-202ENST00000564451 2115 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
KDELR3O43731 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC13.63□□□□□ -0.23
KDELR3O43731 AC008038.1-201ENST00000634247 1314 ntBASIC13.63□□□□□ -0.23
KDELR3O43731 USP44-202ENST00000393091 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
KDELR3O43731 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
KDELR3O43731 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC13.63□□□□□ -0.23
KDELR3O43731 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC13.63□□□□□ -0.23
KDELR3O43731 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
KDELR3O43731 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
KDELR3O43731 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
KDELR3O43731 CDC14B-201ENST00000375240 2547 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
KDELR3O43731 ENSA-208ENST00000369014 2085 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
KDELR3O43731 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
KDELR3O43731 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
KDELR3O43731 CTRL-205ENST00000574481 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
KDELR3O43731 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
KDELR3O43731 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
KDELR3O43731 GTF2F2-201ENST00000340473 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
KDELR3O43731 SERPINA1-205ENST00000404814 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
KDELR3O43731 LIMS1-204ENST00000409441 1627 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
KDELR3O43731 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
KDELR3O43731 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
KDELR3O43731 SLC25A5-201ENST00000317881 1274 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
KDELR3O43731 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
KDELR3O43731 GEMIN8P4-201ENST00000380526 729 ntBASIC13.62□□□□□ -0.23
KDELR3O43731 SPAG5-AS1-201ENST00000414744 2143 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
KDELR3O43731 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC13.62□□□□□ -0.23
KDELR3O43731 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC13.62□□□□□ -0.23
KDELR3O43731 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC13.62□□□□□ -0.23
KDELR3O43731 RPSAP12-201ENST00000435879 888 ntBASIC13.62□□□□□ -0.23
KDELR3O43731 AC024028.1-201ENST00000437145 437 ntTSL 3 BASIC13.62□□□□□ -0.23
KDELR3O43731 AC024293.1-201ENST00000467930 498 ntBASIC13.62□□□□□ -0.23
KDELR3O43731 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC13.62□□□□□ -0.23
KDELR3O43731 TOB1-AS1-202ENST00000514358 690 ntTSL 5 BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms