Protein–RNA interactions for Protein: Q7RTS3

PTF1A, Pancreas transcription factor 1 subunit alpha, humanhuman

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTF1AQ7RTS3 RNA5SP248-201ENST00000365602 127 ntBASIC16.81■□□□□ 0.28
PTF1AQ7RTS3 MRPL55-213ENST00000366740 644 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
PTF1AQ7RTS3 TCEAL1-201ENST00000372624 1164 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTF1AQ7RTS3 SYCP3-203ENST00000392927 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTF1AQ7RTS3 ART2P-201ENST00000415521 822 ntBASIC16.81■□□□□ 0.28
PTF1AQ7RTS3 AC140481.1-202ENST00000436488 525 ntTSL 2 BASIC16.81■□□□□ 0.28
PTF1AQ7RTS3 LINC00332-201ENST00000455241 834 ntTSL 3 BASIC16.81■□□□□ 0.28
PTF1AQ7RTS3 PRKRIP1-202ENST00000462601 884 ntTSL 2 BASIC16.81■□□□□ 0.28
PTF1AQ7RTS3 AC091893.1-201ENST00000503772 399 ntBASIC16.81■□□□□ 0.28
PTF1AQ7RTS3 AC022424.2-201ENST00000514848 454 ntTSL 2 BASIC16.81■□□□□ 0.28
PTF1AQ7RTS3 AC107959.3-201ENST00000520840 484 ntTSL 5 BASIC16.81■□□□□ 0.28
PTF1AQ7RTS3 VEGFA-225ENST00000523950 954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTF1AQ7RTS3 RRNAD1-211ENST00000524343 459 ntTSL 5 BASIC16.81■□□□□ 0.28
PTF1AQ7RTS3 ZG16B-204ENST00000572863 716 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
PTF1AQ7RTS3 MIR4296-201ENST00000581038 88 ntBASIC16.81■□□□□ 0.28
PTF1AQ7RTS3 AC104423.1-201ENST00000591742 728 ntTSL 3 BASIC16.81■□□□□ 0.28
PTF1AQ7RTS3 FAM95B1-214ENST00000593216 759 ntTSL 5 BASIC16.81■□□□□ 0.28
PTF1AQ7RTS3 AL355353.1-201ENST00000604014 330 ntBASIC16.81■□□□□ 0.28
PTF1AQ7RTS3 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
PTF1AQ7RTS3 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTF1AQ7RTS3 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PTF1AQ7RTS3 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTF1AQ7RTS3 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTF1AQ7RTS3 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTF1AQ7RTS3 TCAF1P1-201ENST00000414990 2232 ntBASIC16.81■□□□□ 0.28
PTF1AQ7RTS3 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
PTF1AQ7RTS3 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTF1AQ7RTS3 TAF7L-202ENST00000356784 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTF1AQ7RTS3 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTF1AQ7RTS3 AC012485.1-201ENST00000456601 2509 ntTSL 2 BASIC16.8■□□□□ 0.28
PTF1AQ7RTS3 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTF1AQ7RTS3 LINC00888-202ENST00000471496 1490 ntTSL 3 BASIC16.8■□□□□ 0.28
PTF1AQ7RTS3 PNLIPRP2-201ENST00000579578 1482 ntAPPRIS P5 TSL 2 BASIC16.8■□□□□ 0.28
PTF1AQ7RTS3 TSPY26P-202ENST00000565928 3884 ntBASIC16.8■□□□□ 0.28
PTF1AQ7RTS3 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTF1AQ7RTS3 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
PTF1AQ7RTS3 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
PTF1AQ7RTS3 AL662907.1-201ENST00000622988 1360 ntBASIC16.8■□□□□ 0.28
PTF1AQ7RTS3 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PTF1AQ7RTS3 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTF1AQ7RTS3 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTF1AQ7RTS3 AC006262.1-201ENST00000593980 1316 ntTSL 5 BASIC16.8■□□□□ 0.28
PTF1AQ7RTS3 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTF1AQ7RTS3 TCAF2-201ENST00000357344 2958 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PTF1AQ7RTS3 RPL5-202ENST00000370321 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTF1AQ7RTS3 ALKBH2-202ENST00000429722 1159 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
PTF1AQ7RTS3 CNN2P1-201ENST00000453616 918 ntBASIC16.8■□□□□ 0.28
PTF1AQ7RTS3 HINT1-204ENST00000506908 681 ntTSL 2 BASIC16.8■□□□□ 0.28
PTF1AQ7RTS3 AC007992.1-201ENST00000513953 953 ntBASIC16.8■□□□□ 0.28
PTF1AQ7RTS3 AC090095.1-201ENST00000519275 871 ntBASIC16.8■□□□□ 0.28
PTF1AQ7RTS3 RN7SL624P-201ENST00000580297 278 ntBASIC16.8■□□□□ 0.28
PTF1AQ7RTS3 CTBP2P7-201ENST00000593270 1244 ntBASIC16.8■□□□□ 0.28
PTF1AQ7RTS3 MIR663AHG-218ENST00000598448 804 ntTSL 5 BASIC16.8■□□□□ 0.28
PTF1AQ7RTS3 AC018755.1-201ENST00000601315 1182 ntBASIC16.8■□□□□ 0.28
PTF1AQ7RTS3 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTF1AQ7RTS3 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTF1AQ7RTS3 AL359845.1-201ENST00000458202 1648 ntBASIC16.8■□□□□ 0.28
PTF1AQ7RTS3 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PTF1AQ7RTS3 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PTF1AQ7RTS3 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
PTF1AQ7RTS3 PKMP1-201ENST00000455804 1523 ntBASIC16.8■□□□□ 0.28
PTF1AQ7RTS3 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTF1AQ7RTS3 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTF1AQ7RTS3 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTF1AQ7RTS3 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC16.79■□□□□ 0.28
PTF1AQ7RTS3 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC16.79■□□□□ 0.28
PTF1AQ7RTS3 NFKBIA-208ENST00000557140 1400 ntTSL 5 BASIC16.79■□□□□ 0.28
PTF1AQ7RTS3 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC16.79■□□□□ 0.28
PTF1AQ7RTS3 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC16.79■□□□□ 0.28
PTF1AQ7RTS3 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC16.79■□□□□ 0.28
PTF1AQ7RTS3 AC152010.1-201ENST00000415779 2006 ntBASIC16.79■□□□□ 0.28
PTF1AQ7RTS3 RMND5B-212ENST00000542098 1681 ntTSL 5 BASIC16.79■□□□□ 0.28
PTF1AQ7RTS3 MEMO1-207ENST00000426310 1336 ntTSL 2 BASIC16.79■□□□□ 0.28
PTF1AQ7RTS3 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
PTF1AQ7RTS3 TBC1D21-201ENST00000300504 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTF1AQ7RTS3 TSPEAR-AS2-201ENST00000330490 823 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PTF1AQ7RTS3 NRSN1-201ENST00000378475 800 ntTSL 3 BASIC16.79■□□□□ 0.28
PTF1AQ7RTS3 GNRH2-203ENST00000380346 353 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
PTF1AQ7RTS3 AL121983.2-204ENST00000430592 448 ntTSL 3 BASIC16.79■□□□□ 0.28
PTF1AQ7RTS3 AC024028.1-201ENST00000437145 437 ntTSL 3 BASIC16.79■□□□□ 0.28
PTF1AQ7RTS3 AC098934.2-202ENST00000438944 1033 ntBASIC16.79■□□□□ 0.28
PTF1AQ7RTS3 RN7SKP195-201ENST00000516587 303 ntBASIC16.79■□□□□ 0.28
PTF1AQ7RTS3 LINC02354-202ENST00000548564 573 ntTSL 4 BASIC16.79■□□□□ 0.28
PTF1AQ7RTS3 PSMD7-205ENST00000568615 931 ntTSL 2 BASIC16.79■□□□□ 0.28
PTF1AQ7RTS3 AC007731.1-203ENST00000583722 474 ntTSL 2 BASIC16.79■□□□□ 0.28
PTF1AQ7RTS3 RPSAP67-201ENST00000584105 862 ntBASIC16.79■□□□□ 0.28
PTF1AQ7RTS3 SNHG15-210ENST00000585030 953 ntTSL 3 BASIC16.79■□□□□ 0.28
PTF1AQ7RTS3 AC026304.1-201ENST00000597953 561 ntBASIC16.79■□□□□ 0.28
PTF1AQ7RTS3 FXYD3-210ENST00000604621 548 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
PTF1AQ7RTS3 AC105105.4-201ENST00000610389 713 ntBASIC16.79■□□□□ 0.28
PTF1AQ7RTS3 FAM230A-201ENST00000615181 315 ntTSL 5 BASIC16.79■□□□□ 0.28
PTF1AQ7RTS3 SMIM11B-202ENST00000619874 843 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTF1AQ7RTS3 AC107375.1-201ENST00000564464 2231 ntBASIC16.79■□□□□ 0.28
PTF1AQ7RTS3 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTF1AQ7RTS3 DRD3-201ENST00000295881 1541 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
PTF1AQ7RTS3 NLK-203ENST00000582037 1503 ntTSL 2 BASIC16.79■□□□□ 0.28
PTF1AQ7RTS3 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
PTF1AQ7RTS3 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PTF1AQ7RTS3 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
PTF1AQ7RTS3 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms