Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 DDX11L2-201ENST00000437401 1398 ntBASIC11.4□□□□□ -0.59
CD74P04233 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
CD74P04233 INTS6L-201ENST00000370752 3793 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
CD74P04233 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
CD74P04233 AC087164.2-201ENST00000624514 3130 ntBASIC11.4□□□□□ -0.59
CD74P04233 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
CD74P04233 RUSC1-AS1-202ENST00000446880 1836 ntTSL 2 BASIC11.39□□□□□ -0.59
CD74P04233 DLGAP2-AS1-201ENST00000518009 1810 ntTSL 2 BASIC11.39□□□□□ -0.59
CD74P04233 POLL-203ENST00000370162 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CD74P04233 DYSF-206ENST00000409744 6564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
CD74P04233 DYSF-209ENST00000410041 6594 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
CD74P04233 HSP90AA1-202ENST00000334701 3510 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
CD74P04233 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
CD74P04233 QRICH1-204ENST00000424300 3009 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
CD74P04233 ITGB1BP1-201ENST00000238091 1772 ntTSL 3 BASIC11.39□□□□□ -0.59
CD74P04233 RNF111-201ENST00000348370 5913 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CD74P04233 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
CD74P04233 HNRNPF-202ENST00000356053 2670 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
CD74P04233 HNRNPF-207ENST00000544000 2676 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CD74P04233 RUFY4-202ENST00000374155 2977 ntTSL 2 BASIC11.39□□□□□ -0.59
CD74P04233 ATP2C1-221ENST00000513801 3439 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
CD74P04233 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CD74P04233 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CD74P04233 LRTM2-201ENST00000299194 3688 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
CD74P04233 TPI1P3-201ENST00000335020 740 ntBASIC11.39□□□□□ -0.59
CD74P04233 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CD74P04233 FAM161A-203ENST00000405894 3684 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
CD74P04233 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC11.39□□□□□ -0.59
CD74P04233 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC11.39□□□□□ -0.59
CD74P04233 TRPV1-204ENST00000425167 2607 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
CD74P04233 ITGAL-203ENST00000433423 1416 ntTSL 2 BASIC11.39□□□□□ -0.59
CD74P04233 KRT43P-201ENST00000434019 910 ntBASIC11.39□□□□□ -0.59
CD74P04233 SLC25A5-AS1-203ENST00000446986 1874 ntTSL 2 BASIC11.39□□□□□ -0.59
CD74P04233 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
CD74P04233 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
CD74P04233 RHEB-207ENST00000496004 744 ntTSL 2 BASIC11.39□□□□□ -0.59
CD74P04233 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
CD74P04233 TERF1P3-201ENST00000505638 1227 ntBASIC11.39□□□□□ -0.59
CD74P04233 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC11.39□□□□□ -0.59
CD74P04233 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
CD74P04233 ELP5-212ENST00000574255 671 ntTSL 2 BASIC11.39□□□□□ -0.59
CD74P04233 AC132825.4-202ENST00000578792 434 ntBASIC11.39□□□□□ -0.59
CD74P04233 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC11.39□□□□□ -0.59
CD74P04233 YTHDF3-AS1-201ENST00000603538 718 ntBASIC11.39□□□□□ -0.59
CD74P04233 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC11.39□□□□□ -0.59
CD74P04233 MST1R-201ENST00000296474 4536 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
CD74P04233 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CD74P04233 APBB1-223ENST00000618005 2107 ntTSL 5 BASIC11.39□□□□□ -0.59
CD74P04233 FPR2-203ENST00000598953 1544 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
CD74P04233 ZNF215-207ENST00000610573 1503 ntTSL 5 BASIC11.39□□□□□ -0.59
CD74P04233 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC11.39□□□□□ -0.59
CD74P04233 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CD74P04233 SPATA2-202ENST00000422556 4138 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
CD74P04233 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
CD74P04233 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CD74P04233 SLC38A5-210ENST00000595796 2659 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CD74P04233 NRDC-214ENST00000544028 3819 ntTSL 5 BASIC11.39□□□□□ -0.59
CD74P04233 XYLT2-201ENST00000017003 3507 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CD74P04233 USP11-204ENST00000377107 3515 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
CD74P04233 MPP4-204ENST00000409143 2082 ntTSL 2 BASIC11.39□□□□□ -0.59
CD74P04233 ACOT11-201ENST00000343744 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
CD74P04233 LEPR-201ENST00000344610 2935 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
CD74P04233 AIPL1-201ENST00000250087 2783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
CD74P04233 ATG16L1-202ENST00000373525 2767 ntTSL 5 BASIC11.39□□□□□ -0.59
CD74P04233 ARHGEF10L-202ENST00000361221 4488 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
CD74P04233 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC11.39□□□□□ -0.59
CD74P04233 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
CD74P04233 SMTN-222ENST00000612341 3321 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
CD74P04233 ZFHX2-AS1-201ENST00000553985 2322 ntTSL 2 BASIC11.38□□□□□ -0.59
CD74P04233 CDK16-201ENST00000276052 3016 ntTSL 2 BASIC11.38□□□□□ -0.59
CD74P04233 KLHL30-201ENST00000409223 3726 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
CD74P04233 TCF3-220ENST00000611869 4409 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
CD74P04233 DOK4-210ENST00000566936 2851 ntTSL 3 BASIC11.38□□□□□ -0.59
CD74P04233 TSKU-203ENST00000527881 3554 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
CD74P04233 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC11.38□□□□□ -0.59
CD74P04233 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
CD74P04233 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CD74P04233 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
CD74P04233 USP33-203ENST00000370793 4502 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
CD74P04233 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
CD74P04233 ELMOD3-203ENST00000409013 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CD74P04233 MIR34AHG-203ENST00000635687 4211 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
CD74P04233 SYMPK-214ENST00000599814 6537 ntTSL 2 BASIC11.38□□□□□ -0.59
CD74P04233 PCDHA10-202ENST00000506939 3788 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
CD74P04233 PLK4-210ENST00000514379 3060 ntTSL 2 BASIC11.38□□□□□ -0.59
CD74P04233 FSCN3-201ENST00000265825 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CD74P04233 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CD74P04233 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC11.38□□□□□ -0.59
CD74P04233 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CD74P04233 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC11.38□□□□□ -0.59
CD74P04233 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC11.38□□□□□ -0.59
CD74P04233 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
CD74P04233 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC11.38□□□□□ -0.59
CD74P04233 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC11.38□□□□□ -0.59
CD74P04233 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
CD74P04233 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
CD74P04233 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC11.38□□□□□ -0.59
CD74P04233 AC023310.1-201ENST00000554836 735 ntBASIC11.38□□□□□ -0.59
CD74P04233 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC11.38□□□□□ -0.59
CD74P04233 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC11.38□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms