Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SHKBP1Q8TBC3 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC14.2□□□□□ -0.14
SHKBP1Q8TBC3 MIR4746-201ENST00000579802 71 ntBASIC14.2□□□□□ -0.14
SHKBP1Q8TBC3 AL356740.1-201ENST00000602192 1297 ntBASIC14.2□□□□□ -0.14
SHKBP1Q8TBC3 AL627230.2-201ENST00000613254 655 ntBASIC14.2□□□□□ -0.14
SHKBP1Q8TBC3 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC14.2□□□□□ -0.14
SHKBP1Q8TBC3 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC14.2□□□□□ -0.14
SHKBP1Q8TBC3 LINC00969-253ENST00000625338 804 ntTSL 5 BASIC14.2□□□□□ -0.14
SHKBP1Q8TBC3 MEP1AP1-201ENST00000636082 1097 ntBASIC14.2□□□□□ -0.14
SHKBP1Q8TBC3 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SHKBP1Q8TBC3 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
SHKBP1Q8TBC3 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SHKBP1Q8TBC3 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SHKBP1Q8TBC3 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC14.2□□□□□ -0.14
SHKBP1Q8TBC3 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
SHKBP1Q8TBC3 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SHKBP1Q8TBC3 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SHKBP1Q8TBC3 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC14.2□□□□□ -0.14
SHKBP1Q8TBC3 CARS-214ENST00000529772 2637 ntTSL 2 BASIC14.2□□□□□ -0.14
SHKBP1Q8TBC3 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SHKBP1Q8TBC3 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SHKBP1Q8TBC3 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
SHKBP1Q8TBC3 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SHKBP1Q8TBC3 MKRN2-203ENST00000448482 1679 ntTSL 5 BASIC14.2□□□□□ -0.14
SHKBP1Q8TBC3 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SHKBP1Q8TBC3 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC14.2□□□□□ -0.14
SHKBP1Q8TBC3 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SHKBP1Q8TBC3 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC14.2□□□□□ -0.14
SHKBP1Q8TBC3 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SHKBP1Q8TBC3 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SHKBP1Q8TBC3 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
SHKBP1Q8TBC3 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
SHKBP1Q8TBC3 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
SHKBP1Q8TBC3 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SHKBP1Q8TBC3 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.19□□□□□ -0.14
SHKBP1Q8TBC3 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
SHKBP1Q8TBC3 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SHKBP1Q8TBC3 AC020931.1-201ENST00000589622 1346 ntBASIC14.19□□□□□ -0.14
SHKBP1Q8TBC3 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SHKBP1Q8TBC3 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SHKBP1Q8TBC3 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
SHKBP1Q8TBC3 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
SHKBP1Q8TBC3 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
SHKBP1Q8TBC3 PDE2A-218ENST00000540345 3027 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SHKBP1Q8TBC3 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
SHKBP1Q8TBC3 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
SHKBP1Q8TBC3 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SHKBP1Q8TBC3 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SHKBP1Q8TBC3 AL031719.1-201ENST00000623365 2587 ntBASIC14.19□□□□□ -0.14
SHKBP1Q8TBC3 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SHKBP1Q8TBC3 BCCIP-203ENST00000368759 1433 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SHKBP1Q8TBC3 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SHKBP1Q8TBC3 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
SHKBP1Q8TBC3 DPPA5-201ENST00000370370 679 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SHKBP1Q8TBC3 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
SHKBP1Q8TBC3 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC14.19□□□□□ -0.14
SHKBP1Q8TBC3 AC128689.1-202ENST00000459861 827 ntTSL 3 BASIC14.19□□□□□ -0.14
SHKBP1Q8TBC3 TMEM14B-215ENST00000481240 1032 ntTSL 2 BASIC14.19□□□□□ -0.14
SHKBP1Q8TBC3 SAA2-206ENST00000530400 323 ntTSL 3 BASIC14.19□□□□□ -0.14
SHKBP1Q8TBC3 METTL7AP1-201ENST00000547343 496 ntBASIC14.19□□□□□ -0.14
SHKBP1Q8TBC3 KCCAT198-201ENST00000549251 549 ntTSL 4 BASIC14.19□□□□□ -0.14
SHKBP1Q8TBC3 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC14.19□□□□□ -0.14
SHKBP1Q8TBC3 RN7SL134P-201ENST00000579756 303 ntBASIC14.19□□□□□ -0.14
SHKBP1Q8TBC3 KRT17P4-206ENST00000584151 719 ntTSL 4 BASIC14.19□□□□□ -0.14
SHKBP1Q8TBC3 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
SHKBP1Q8TBC3 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
SHKBP1Q8TBC3 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
SHKBP1Q8TBC3 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
SHKBP1Q8TBC3 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
SHKBP1Q8TBC3 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
SHKBP1Q8TBC3 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
SHKBP1Q8TBC3 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SHKBP1Q8TBC3 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
SHKBP1Q8TBC3 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.19□□□□□ -0.14
SHKBP1Q8TBC3 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC14.19□□□□□ -0.14
SHKBP1Q8TBC3 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
SHKBP1Q8TBC3 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SHKBP1Q8TBC3 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SHKBP1Q8TBC3 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SHKBP1Q8TBC3 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
SHKBP1Q8TBC3 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
SHKBP1Q8TBC3 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SHKBP1Q8TBC3 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SHKBP1Q8TBC3 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SHKBP1Q8TBC3 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SHKBP1Q8TBC3 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
SHKBP1Q8TBC3 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SHKBP1Q8TBC3 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC14.19□□□□□ -0.14
SHKBP1Q8TBC3 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SHKBP1Q8TBC3 KRT8P25-201ENST00000473150 1456 ntBASIC14.18□□□□□ -0.14
SHKBP1Q8TBC3 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHKBP1Q8TBC3 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHKBP1Q8TBC3 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHKBP1Q8TBC3 USP31-203ENST00000567975 2142 ntTSL 2 BASIC14.18□□□□□ -0.14
SHKBP1Q8TBC3 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHKBP1Q8TBC3 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC14.18□□□□□ -0.14
SHKBP1Q8TBC3 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHKBP1Q8TBC3 ZNF570-202ENST00000586475 1985 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SHKBP1Q8TBC3 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHKBP1Q8TBC3 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms