Protein–RNA interactions for Protein: Q2M3C7

SPHKAP, A-kinase anchor protein SPHKAP, humanhuman

Predictions only

Length 1,700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHKAPQ2M3C7 KRTAP9-10P-201ENST00000435672 207 ntBASIC18.7■□□□□ 0.58
SPHKAPQ2M3C7 AC140481.1-202ENST00000436488 525 ntTSL 2 BASIC18.7■□□□□ 0.58
SPHKAPQ2M3C7 UCMA-202ENST00000463405 763 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
SPHKAPQ2M3C7 SLC10A7-208ENST00000511374 869 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SPHKAPQ2M3C7 GINS4-203ENST00000518671 1158 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
SPHKAPQ2M3C7 WISP1-205ENST00000519433 545 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SPHKAPQ2M3C7 AC090589.3-201ENST00000524412 574 ntTSL 5 BASIC18.7■□□□□ 0.58
SPHKAPQ2M3C7 AP001979.2-201ENST00000526254 975 ntTSL 5 BASIC18.7■□□□□ 0.58
SPHKAPQ2M3C7 AL390726.3-201ENST00000567428 635 ntTSL 5 BASIC18.7■□□□□ 0.58
SPHKAPQ2M3C7 AC109597.2-201ENST00000569407 927 ntTSL 3 BASIC18.7■□□□□ 0.58
SPHKAPQ2M3C7 SRD5A3-AS1-203ENST00000591915 709 ntTSL 5 BASIC18.7■□□□□ 0.58
SPHKAPQ2M3C7 SLC50A1-214ENST00000622581 1245 ntTSL 5 BASIC18.7■□□□□ 0.58
SPHKAPQ2M3C7 AC021683.4-201ENST00000623348 1099 ntBASIC18.7■□□□□ 0.58
SPHKAPQ2M3C7 LINC01398-202ENST00000634819 1292 ntTSL 5 BASIC18.7■□□□□ 0.58
SPHKAPQ2M3C7 CD74-201ENST00000009530 981 ntAPPRIS P2 TSL 2 BASIC18.7■□□□□ 0.58
SPHKAPQ2M3C7 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC18.7■□□□□ 0.58
SPHKAPQ2M3C7 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC18.7■□□□□ 0.58
SPHKAPQ2M3C7 ZCWPW1-208ENST00000490721 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SPHKAPQ2M3C7 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SPHKAPQ2M3C7 PRR3-202ENST00000376560 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SPHKAPQ2M3C7 AC106785.2-201ENST00000564385 1319 ntBASIC18.7■□□□□ 0.58
SPHKAPQ2M3C7 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SPHKAPQ2M3C7 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
SPHKAPQ2M3C7 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC18.7■□□□□ 0.58
SPHKAPQ2M3C7 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
SPHKAPQ2M3C7 CCDC33-206ENST00000558821 1993 ntTSL 2 BASIC18.7■□□□□ 0.58
SPHKAPQ2M3C7 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SPHKAPQ2M3C7 DTX3L-202ENST00000383661 687 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SPHKAPQ2M3C7 CASP2-203ENST00000392925 616 ntTSL 3 BASIC18.69■□□□□ 0.58
SPHKAPQ2M3C7 NANOS3-202ENST00000397555 769 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
SPHKAPQ2M3C7 AC006967.2-201ENST00000426169 432 ntTSL 3 BASIC18.69■□□□□ 0.58
SPHKAPQ2M3C7 AC046143.1-201ENST00000447139 972 ntTSL 2 BASIC18.69■□□□□ 0.58
SPHKAPQ2M3C7 AP000753.1-201ENST00000542805 573 ntTSL 4 BASIC18.69■□□□□ 0.58
SPHKAPQ2M3C7 NDUFB1-202ENST00000553514 454 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
SPHKAPQ2M3C7 MIR6165-201ENST00000614803 84 ntBASIC18.69■□□□□ 0.58
SPHKAPQ2M3C7 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SPHKAPQ2M3C7 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SPHKAPQ2M3C7 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SPHKAPQ2M3C7 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
SPHKAPQ2M3C7 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC18.69■□□□□ 0.58
SPHKAPQ2M3C7 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC18.69■□□□□ 0.58
SPHKAPQ2M3C7 AOC4P-203ENST00000566825 2289 ntBASIC18.69■□□□□ 0.58
SPHKAPQ2M3C7 TBC1D3I-201ENST00000616671 1982 ntTSL 5 BASIC18.69■□□□□ 0.58
SPHKAPQ2M3C7 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SPHKAPQ2M3C7 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC18.69■□□□□ 0.58
SPHKAPQ2M3C7 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
SPHKAPQ2M3C7 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC18.69■□□□□ 0.58
SPHKAPQ2M3C7 A1CF-204ENST00000373997 2116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SPHKAPQ2M3C7 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
SPHKAPQ2M3C7 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SPHKAPQ2M3C7 TP73-207ENST00000378290 1831 ntTSL 2 BASIC18.69■□□□□ 0.58
SPHKAPQ2M3C7 USP14-208ENST00000582707 1803 ntTSL 5 BASIC18.69■□□□□ 0.58
SPHKAPQ2M3C7 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC18.69■□□□□ 0.58
SPHKAPQ2M3C7 AL133464.1-205ENST00000634595 1535 ntTSL 5 BASIC18.69■□□□□ 0.58
SPHKAPQ2M3C7 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
SPHKAPQ2M3C7 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC18.69■□□□□ 0.58
SPHKAPQ2M3C7 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
SPHKAPQ2M3C7 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SPHKAPQ2M3C7 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SPHKAPQ2M3C7 MT1F-201ENST00000334350 690 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SPHKAPQ2M3C7 MIR181D-201ENST00000384853 137 ntBASIC18.69■□□□□ 0.58
SPHKAPQ2M3C7 MIR766-201ENST00000390223 111 ntBASIC18.69■□□□□ 0.58
SPHKAPQ2M3C7 SKA1-203ENST00000417656 1095 ntTSL 2 BASIC18.69■□□□□ 0.58
SPHKAPQ2M3C7 HNRNPA1P68-201ENST00000425806 979 ntBASIC18.69■□□□□ 0.58
SPHKAPQ2M3C7 AC069257.3-201ENST00000431391 708 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
SPHKAPQ2M3C7 LDHAL6CP-201ENST00000502352 1142 ntBASIC18.69■□□□□ 0.58
SPHKAPQ2M3C7 AL157871.2-201ENST00000556212 552 ntTSL 3 BASIC18.69■□□□□ 0.58
SPHKAPQ2M3C7 NAT9-204ENST00000578822 839 ntTSL 3 BASIC18.69■□□□□ 0.58
SPHKAPQ2M3C7 RN7SL732P-201ENST00000581157 300 ntBASIC18.69■□□□□ 0.58
SPHKAPQ2M3C7 AC073592.10-201ENST00000624789 597 ntBASIC18.69■□□□□ 0.58
SPHKAPQ2M3C7 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SPHKAPQ2M3C7 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
SPHKAPQ2M3C7 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SPHKAPQ2M3C7 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SPHKAPQ2M3C7 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SPHKAPQ2M3C7 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SPHKAPQ2M3C7 PADI6-201ENST00000619609 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SPHKAPQ2M3C7 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
SPHKAPQ2M3C7 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SPHKAPQ2M3C7 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC18.68■□□□□ 0.58
SPHKAPQ2M3C7 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SPHKAPQ2M3C7 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SPHKAPQ2M3C7 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SPHKAPQ2M3C7 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SPHKAPQ2M3C7 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SPHKAPQ2M3C7 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
SPHKAPQ2M3C7 MRPL27-201ENST00000225969 716 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SPHKAPQ2M3C7 APOBEC3B-204ENST00000407298 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SPHKAPQ2M3C7 AC006059.1-201ENST00000438017 722 ntTSL 5 BASIC18.68■□□□□ 0.58
SPHKAPQ2M3C7 IQCJ-202ENST00000451172 885 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
SPHKAPQ2M3C7 CHCHD10-204ENST00000520222 384 ntTSL 3 BASIC18.68■□□□□ 0.58
SPHKAPQ2M3C7 IGHV1OR16-3-201ENST00000568138 205 ntBASIC18.68■□□□□ 0.58
SPHKAPQ2M3C7 MIR4309-201ENST00000582498 83 ntBASIC18.68■□□□□ 0.58
SPHKAPQ2M3C7 CREB5-204ENST00000396300 2319 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SPHKAPQ2M3C7 RBM4-202ENST00000396053 1337 ntTSL 2 BASIC18.68■□□□□ 0.58
SPHKAPQ2M3C7 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
SPHKAPQ2M3C7 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SPHKAPQ2M3C7 CNMD-201ENST00000377962 1410 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
SPHKAPQ2M3C7 VMP1-201ENST00000262291 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SPHKAPQ2M3C7 JAML-211ENST00000533261 1508 ntTSL 5 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms