Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CLDN20P56880 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CLDN20P56880 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
CLDN20P56880 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CLDN20P56880 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CLDN20P56880 PCDHB17P-202ENST00000623466 3066 ntBASIC12.49□□□□□ -0.41
CLDN20P56880 WTH3DI-201ENST00000623617 3032 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
CLDN20P56880 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CLDN20P56880 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
CLDN20P56880 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CLDN20P56880 H1FX-AS1-201ENST00000383461 2600 ntTSL 2 BASIC12.49□□□□□ -0.41
CLDN20P56880 PID1-204ENST00000409462 2387 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CLDN20P56880 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CLDN20P56880 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
CLDN20P56880 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CLDN20P56880 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC12.49□□□□□ -0.41
CLDN20P56880 SALL4P6-201ENST00000429385 1691 ntBASIC12.49□□□□□ -0.41
CLDN20P56880 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC12.49□□□□□ -0.41
CLDN20P56880 ABCD1P2-201ENST00000429313 1601 ntBASIC12.49□□□□□ -0.41
CLDN20P56880 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CLDN20P56880 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
CLDN20P56880 NRADDP-202ENST00000641269 1585 ntBASIC12.49□□□□□ -0.41
CLDN20P56880 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CLDN20P56880 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC12.49□□□□□ -0.41
CLDN20P56880 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC12.49□□□□□ -0.41
CLDN20P56880 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
CLDN20P56880 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CLDN20P56880 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CLDN20P56880 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC12.49□□□□□ -0.41
CLDN20P56880 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CLDN20P56880 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
CLDN20P56880 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CLDN20P56880 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC12.49□□□□□ -0.41
CLDN20P56880 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CLDN20P56880 MIR1307-201ENST00000408840 149 ntBASIC12.49□□□□□ -0.41
CLDN20P56880 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC12.49□□□□□ -0.41
CLDN20P56880 CSNK1G2P1-201ENST00000442675 955 ntBASIC12.49□□□□□ -0.41
CLDN20P56880 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC12.49□□□□□ -0.41
CLDN20P56880 DPY19L2P5-201ENST00000456300 331 ntBASIC12.49□□□□□ -0.41
CLDN20P56880 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
CLDN20P56880 RN7SL375P-201ENST00000492442 298 ntBASIC12.49□□□□□ -0.41
CLDN20P56880 PRSS3P1-201ENST00000503996 742 ntBASIC12.49□□□□□ -0.41
CLDN20P56880 RN7SKP155-201ENST00000516031 288 ntBASIC12.49□□□□□ -0.41
CLDN20P56880 RNA5SP406-201ENST00000516106 112 ntBASIC12.49□□□□□ -0.41
CLDN20P56880 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC12.49□□□□□ -0.41
CLDN20P56880 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC12.49□□□□□ -0.41
CLDN20P56880 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC12.49□□□□□ -0.41
CLDN20P56880 DNM1P30-201ENST00000563586 452 ntBASIC12.49□□□□□ -0.41
CLDN20P56880 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
CLDN20P56880 RN7SL357P-201ENST00000581065 298 ntBASIC12.49□□□□□ -0.41
CLDN20P56880 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC12.49□□□□□ -0.41
CLDN20P56880 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC12.49□□□□□ -0.41
CLDN20P56880 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC12.49□□□□□ -0.41
CLDN20P56880 AC140113.1-201ENST00000603467 169 ntBASIC12.49□□□□□ -0.41
CLDN20P56880 LINC00244-201ENST00000625073 613 ntBASIC12.49□□□□□ -0.41
CLDN20P56880 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
CLDN20P56880 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC12.49□□□□□ -0.41
CLDN20P56880 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CLDN20P56880 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CLDN20P56880 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CLDN20P56880 RBM15-202ENST00000487146 3316 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CLDN20P56880 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
CLDN20P56880 LEPROTL1-201ENST00000321250 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CLDN20P56880 MAN2C1-242ENST00000569482 3177 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CLDN20P56880 PLEKHG3-203ENST00000471182 3106 ntTSL 5 BASIC12.49□□□□□ -0.41
CLDN20P56880 LRRC41-206ENST00000615587 2842 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CLDN20P56880 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CLDN20P56880 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CLDN20P56880 DCAF13-201ENST00000297579 2642 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CLDN20P56880 MKL1-211ENST00000618196 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CLDN20P56880 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CLDN20P56880 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
CLDN20P56880 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CLDN20P56880 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC12.49□□□□□ -0.41
CLDN20P56880 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CLDN20P56880 EPS15L1-202ENST00000455140 3266 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
CLDN20P56880 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLDN20P56880 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLDN20P56880 SH3TC1-201ENST00000245105 4226 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
CLDN20P56880 C10orf90-202ENST00000356858 2995 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
CLDN20P56880 ZFYVE27-201ENST00000337540 2927 ntTSL 2 BASIC12.48□□□□□ -0.41
CLDN20P56880 DDX12P-201ENST00000432996 2947 ntBASIC12.48□□□□□ -0.41
CLDN20P56880 AC020763.3-201ENST00000625095 2904 ntBASIC12.48□□□□□ -0.41
CLDN20P56880 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLDN20P56880 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLDN20P56880 GRIPAP1-215ENST00000622599 2881 ntTSL 5 BASIC12.48□□□□□ -0.41
CLDN20P56880 FAM76A-204ENST00000373954 3567 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLDN20P56880 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
CLDN20P56880 AGAP5-202ENST00000443782 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLDN20P56880 AGAP4-203ENST00000448048 2439 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLDN20P56880 DNM1P41-201ENST00000623634 3350 ntBASIC12.48□□□□□ -0.41
CLDN20P56880 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC12.48□□□□□ -0.41
CLDN20P56880 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC12.48□□□□□ -0.41
CLDN20P56880 AGAP6-202ENST00000412531 2372 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLDN20P56880 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CLDN20P56880 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLDN20P56880 ZFAND3-203ENST00000373391 3001 ntTSL 5 BASIC12.48□□□□□ -0.41
CLDN20P56880 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
CLDN20P56880 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLDN20P56880 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms