Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC17.76■□□□□ 0.43
USP6P35125 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
USP6P35125 SUCLG2-204ENST00000493112 1516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
USP6P35125 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
USP6P35125 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC17.76■□□□□ 0.43
USP6P35125 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
USP6P35125 AL590399.1-202ENST00000429818 1480 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
USP6P35125 AL512625.1-202ENST00000476224 1480 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
USP6P35125 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC17.76■□□□□ 0.43
USP6P35125 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC17.76■□□□□ 0.43
USP6P35125 ALX1-201ENST00000316824 1445 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
USP6P35125 HACD3-207ENST00000566074 1658 ntTSL 5 BASIC17.76■□□□□ 0.43
USP6P35125 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC17.75■□□□□ 0.43
USP6P35125 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC17.75■□□□□ 0.43
USP6P35125 KIF9-208ENST00000452770 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP6P35125 LILRB1-202ENST00000396315 2157 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP6P35125 AP000897.1-201ENST00000584036 1613 ntBASIC17.75■□□□□ 0.43
USP6P35125 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
USP6P35125 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
USP6P35125 MEFV-209ENST00000541159 1888 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
USP6P35125 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC17.75■□□□□ 0.43
USP6P35125 GIMAP4-202ENST00000461940 1569 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
USP6P35125 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP6P35125 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP6P35125 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP6P35125 IGHV3-66-201ENST00000390632 427 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
USP6P35125 U3.41-201ENST00000408711 219 ntBASIC17.75■□□□□ 0.43
USP6P35125 CYCS-203ENST00000409764 799 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
USP6P35125 KDM5C-IT1-201ENST00000412242 755 ntTSL 5 BASIC17.75■□□□□ 0.43
USP6P35125 KRT18P39-201ENST00000415349 1299 ntBASIC17.75■□□□□ 0.43
USP6P35125 AL121972.2-201ENST00000431108 556 ntTSL 4 BASIC17.75■□□□□ 0.43
USP6P35125 PLAC9P1-203ENST00000440031 223 ntBASIC17.75■□□□□ 0.43
USP6P35125 FTLP16-201ENST00000446400 513 ntBASIC17.75■□□□□ 0.43
USP6P35125 AL589666.1-201ENST00000503906 835 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
USP6P35125 AC108112.1-201ENST00000505567 659 ntTSL 5 BASIC17.75■□□□□ 0.43
USP6P35125 LINC01606-208ENST00000521653 557 ntTSL 4 BASIC17.75■□□□□ 0.43
USP6P35125 ZNF268-208ENST00000539248 759 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
USP6P35125 ZNF268-212ENST00000542711 861 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
USP6P35125 AC093072.1-201ENST00000589196 602 ntTSL 4 BASIC17.75■□□□□ 0.43
USP6P35125 DMRTC1-201ENST00000595412 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP6P35125 Metazoa_SRP.67-201ENST00000617099 296 ntBASIC17.75■□□□□ 0.43
USP6P35125 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP6P35125 CXorf40A-203ENST00000422892 1536 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
USP6P35125 CREB5-203ENST00000396299 2294 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
USP6P35125 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
USP6P35125 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP6P35125 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP6P35125 CFAP65-204ENST00000410037 2703 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
USP6P35125 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP6P35125 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
USP6P35125 LIPC-202ENST00000356113 2161 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
USP6P35125 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP6P35125 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.75■□□□□ 0.43
USP6P35125 HTR3D-202ENST00000382489 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP6P35125 UBA3-201ENST00000349511 2112 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
USP6P35125 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
USP6P35125 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP6P35125 C20orf96-203ENST00000400269 1608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP6P35125 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
USP6P35125 AL009178.2-201ENST00000597278 2719 ntBASIC17.75■□□□□ 0.43
USP6P35125 AC073862.5-201ENST00000624129 2027 ntBASIC17.75■□□□□ 0.43
USP6P35125 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP6P35125 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP6P35125 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
USP6P35125 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC17.74■□□□□ 0.43
USP6P35125 SDR16C5-203ENST00000522671 1988 ntTSL 2 BASIC17.74■□□□□ 0.43
USP6P35125 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP6P35125 NUP85-201ENST00000245544 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP6P35125 CTLA4-201ENST00000295854 525 ntTSL 5 BASIC17.74■□□□□ 0.43
USP6P35125 VKORC1-203ENST00000354895 901 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
USP6P35125 AC026884.1-201ENST00000418296 457 ntBASIC17.74■□□□□ 0.43
USP6P35125 AC007312.1-201ENST00000427493 258 ntBASIC17.74■□□□□ 0.43
USP6P35125 LAMTOR5-203ENST00000474861 1154 ntTSL 2 BASIC17.74■□□□□ 0.43
USP6P35125 CMC2-202ENST00000486645 766 ntTSL 3 BASIC17.74■□□□□ 0.43
USP6P35125 DIS3L2P1-201ENST00000509197 559 ntBASIC17.74■□□□□ 0.43
USP6P35125 AC090825.2-201ENST00000557959 739 ntBASIC17.74■□□□□ 0.43
USP6P35125 AC007608.2-201ENST00000569940 1146 ntTSL 3 BASIC17.74■□□□□ 0.43
USP6P35125 AC008764.4-207ENST00000600705 956 ntTSL 2 BASIC17.74■□□□□ 0.43
USP6P35125 AC127002.1-201ENST00000619123 455 ntBASIC17.74■□□□□ 0.43
USP6P35125 AC073592.10-201ENST00000624789 597 ntBASIC17.74■□□□□ 0.43
USP6P35125 HMGB1-202ENST00000339872 2319 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
USP6P35125 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
USP6P35125 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC17.74■□□□□ 0.43
USP6P35125 OS9-203ENST00000389142 2457 ntTSL 5 BASIC17.74■□□□□ 0.43
USP6P35125 SLC26A5-201ENST00000306312 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP6P35125 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP6P35125 FHL2-208ENST00000409807 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP6P35125 DDC-206ENST00000431062 1620 ntTSL 5 BASIC17.74■□□□□ 0.43
USP6P35125 PMP22-203ENST00000395938 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP6P35125 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP6P35125 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP6P35125 AL590428.1-201ENST00000428865 1973 ntTSL 2 BASIC17.74■□□□□ 0.43
USP6P35125 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC17.74■□□□□ 0.43
USP6P35125 SPAG8-201ENST00000340291 1759 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP6P35125 POLR2J2-203ENST00000476151 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP6P35125 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP6P35125 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
USP6P35125 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP6P35125 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP6P35125 LINC02381-202ENST00000635070 1341 ntTSL 5 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms