Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 AC245100.6-201ENST00000427169 1918 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CD74P04233 GIMAP1-GIMAP5-201ENST00000611999 2148 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
CD74P04233 FOXD2-AS1-201ENST00000445551 2509 ntBASIC11.41□□□□□ -0.58
CD74P04233 KIF21B-204ENST00000461742 5428 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CD74P04233 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CD74P04233 DRD2-204ENST00000538967 1493 ntAPPRIS ALT1 TSL 5 BASIC11.41□□□□□ -0.58
CD74P04233 RAN-210ENST00000541630 1475 ntTSL 2 BASIC11.41□□□□□ -0.58
CD74P04233 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
CD74P04233 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CD74P04233 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CD74P04233 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CD74P04233 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC11.41□□□□□ -0.58
CD74P04233 MRPL36-201ENST00000382647 587 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
CD74P04233 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CD74P04233 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CD74P04233 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC11.41□□□□□ -0.58
CD74P04233 AC005076.1-201ENST00000433446 769 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CD74P04233 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CD74P04233 AC005077.3-201ENST00000449614 213 ntBASIC11.41□□□□□ -0.58
CD74P04233 AL365203.1-201ENST00000450890 1048 ntTSL 3 BASIC11.41□□□□□ -0.58
CD74P04233 BX284668.4-201ENST00000453917 508 ntBASIC11.41□□□□□ -0.58
CD74P04233 AP000812.2-201ENST00000538934 718 ntBASIC11.41□□□□□ -0.58
CD74P04233 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CD74P04233 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC11.41□□□□□ -0.58
CD74P04233 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC11.41□□□□□ -0.58
CD74P04233 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC11.41□□□□□ -0.58
CD74P04233 AC090971.1-201ENST00000559302 510 ntTSL 2 BASIC11.41□□□□□ -0.58
CD74P04233 APRT-204ENST00000563655 709 ntTSL 5 BASIC11.41□□□□□ -0.58
CD74P04233 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC11.41□□□□□ -0.58
CD74P04233 RN7SL204P-201ENST00000582831 262 ntBASIC11.41□□□□□ -0.58
CD74P04233 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CD74P04233 PAK1-215ENST00000530617 3001 ntTSL 2 BASIC11.41□□□□□ -0.58
CD74P04233 ESYT1-202ENST00000394048 4388 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
CD74P04233 ACOX2-201ENST00000302819 2426 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CD74P04233 MTMR2-201ENST00000346299 4681 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CD74P04233 MTMR2-203ENST00000393223 4681 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CD74P04233 KRT78-202ENST00000359499 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
CD74P04233 HMGCS1-201ENST00000325110 3506 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CD74P04233 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
CD74P04233 AC021752.1-202ENST00000613161 2398 ntTSL 2 BASIC11.41□□□□□ -0.58
CD74P04233 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
CD74P04233 EPHB6-211ENST00000619012 4011 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CD74P04233 PID1-203ENST00000392055 2533 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
CD74P04233 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CD74P04233 PRKAG2-202ENST00000392801 2281 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
CD74P04233 TRIM32-203ENST00000450136 3717 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CD74P04233 RNF214-205ENST00000531287 1706 ntTSL 2 BASIC11.4□□□□□ -0.58
CD74P04233 LAMB3-201ENST00000356082 4055 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CD74P04233 PAX6-207ENST00000379129 2614 ntAPPRIS P4 TSL 5 BASIC11.4□□□□□ -0.58
CD74P04233 AKNA-201ENST00000223791 4414 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
CD74P04233 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
CD74P04233 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
CD74P04233 CPSF6-201ENST00000266679 2229 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
CD74P04233 ST3GAL5-204ENST00000393808 2236 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
CD74P04233 ADAMTSL4-202ENST00000369038 4167 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
CD74P04233 PML-210ENST00000563500 4502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
CD74P04233 TNK2-208ENST00000428187 4235 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
CD74P04233 NAPB-207ENST00000617876 3883 ntAPPRIS ALT1 TSL 2 BASIC11.4□□□□□ -0.58
CD74P04233 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CD74P04233 STPG4-201ENST00000294947 1621 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
CD74P04233 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CD74P04233 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
CD74P04233 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CD74P04233 AC098614.1-201ENST00000368528 745 ntBASIC11.4□□□□□ -0.58
CD74P04233 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC11.4□□□□□ -0.58
CD74P04233 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
CD74P04233 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC11.4□□□□□ -0.58
CD74P04233 AC004895.1-202ENST00000435547 547 ntTSL 5 BASIC11.4□□□□□ -0.58
CD74P04233 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC11.4□□□□□ -0.58
CD74P04233 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC11.4□□□□□ -0.58
CD74P04233 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC11.4□□□□□ -0.58
CD74P04233 RN7SL530P-201ENST00000485097 298 ntBASIC11.4□□□□□ -0.58
CD74P04233 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC11.4□□□□□ -0.58
CD74P04233 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC11.4□□□□□ -0.58
CD74P04233 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
CD74P04233 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
CD74P04233 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC11.4□□□□□ -0.58
CD74P04233 IFI27L1-212ENST00000557218 413 ntTSL 3 BASIC11.4□□□□□ -0.58
CD74P04233 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC11.4□□□□□ -0.58
CD74P04233 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC11.4□□□□□ -0.58
CD74P04233 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC11.4□□□□□ -0.58
CD74P04233 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC11.4□□□□□ -0.58
CD74P04233 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC11.4□□□□□ -0.58
CD74P04233 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
CD74P04233 BAIAP2L1-201ENST00000005260 3622 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CD74P04233 LITAF-203ENST00000413364 2292 ntTSL 2 BASIC11.4□□□□□ -0.58
CD74P04233 TRPC6-201ENST00000344327 4612 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CD74P04233 DYSF-203ENST00000409366 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
CD74P04233 DYSF-205ENST00000409651 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
CD74P04233 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CD74P04233 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CD74P04233 FAM105A-201ENST00000274217 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CD74P04233 C14orf159-219ENST00000521077 2719 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
CD74P04233 RFWD3-202ENST00000571750 3033 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
CD74P04233 STRAP-202ENST00000419869 1866 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
CD74P04233 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
CD74P04233 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
CD74P04233 ARRDC3-AS1-201ENST00000625713 2500 ntTSL 2 BASIC11.4□□□□□ -0.59
CD74P04233 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
CD74P04233 OSTM1-AS1-202ENST00000441184 3334 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms