Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
SCN2BO60939 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SCN2BO60939 DKKL1P1-201ENST00000400550 698 ntBASIC12.87□□□□□ -0.35
SCN2BO60939 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SCN2BO60939 SCARNA12-201ENST00000459155 270 ntBASIC12.87□□□□□ -0.35
SCN2BO60939 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC12.87□□□□□ -0.35
SCN2BO60939 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SCN2BO60939 AL137779.3-201ENST00000553295 729 ntBASIC12.87□□□□□ -0.35
SCN2BO60939 AL161670.2-201ENST00000557650 1227 ntBASIC12.87□□□□□ -0.35
SCN2BO60939 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC12.87□□□□□ -0.35
SCN2BO60939 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC12.87□□□□□ -0.35
SCN2BO60939 MIR4754-201ENST00000582477 89 ntBASIC12.87□□□□□ -0.35
SCN2BO60939 MIR6869-201ENST00000619434 62 ntBASIC12.87□□□□□ -0.35
SCN2BO60939 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
SCN2BO60939 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC12.87□□□□□ -0.35
SCN2BO60939 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SCN2BO60939 ARHGEF9-226ENST00000636392 1920 ntTSL 5 BASIC12.87□□□□□ -0.35
SCN2BO60939 ZCRB1-201ENST00000266529 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SCN2BO60939 BEST1-208ENST00000534553 1829 ntTSL 2 BASIC12.87□□□□□ -0.35
SCN2BO60939 SERPING1-203ENST00000378323 1733 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
SCN2BO60939 ZNF197-204ENST00000383745 2935 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SCN2BO60939 ODCP-201ENST00000459650 1639 ntBASIC12.87□□□□□ -0.35
SCN2BO60939 CBR4-202ENST00000504480 1602 ntTSL 2 BASIC12.87□□□□□ -0.35
SCN2BO60939 ABCC4-206ENST00000536256 2840 ntTSL 2 BASIC12.87□□□□□ -0.35
SCN2BO60939 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SCN2BO60939 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SCN2BO60939 AC006372.4-201ENST00000624122 1543 ntBASIC12.87□□□□□ -0.35
SCN2BO60939 PID1-202ENST00000392054 2745 ntTSL 2 BASIC12.87□□□□□ -0.35
SCN2BO60939 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SCN2BO60939 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
SCN2BO60939 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SCN2BO60939 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SCN2BO60939 FAM156B-201ENST00000416841 2537 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SCN2BO60939 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SCN2BO60939 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SCN2BO60939 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SCN2BO60939 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
SCN2BO60939 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
SCN2BO60939 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SCN2BO60939 ZNF564-201ENST00000339282 2935 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SCN2BO60939 ZNF595-205ENST00000610261 2911 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
SCN2BO60939 GK-203ENST00000378943 3707 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SCN2BO60939 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC12.86□□□□□ -0.35
SCN2BO60939 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SCN2BO60939 H1FX-AS1-201ENST00000383461 2600 ntTSL 2 BASIC12.86□□□□□ -0.35
SCN2BO60939 POLD1-205ENST00000595904 3402 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SCN2BO60939 AC090502.4-201ENST00000551714 1386 ntBASIC12.86□□□□□ -0.35
SCN2BO60939 ENTPD3-204ENST00000456402 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SCN2BO60939 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
SCN2BO60939 PDE1B-203ENST00000538346 1711 ntTSL 2 BASIC12.86□□□□□ -0.35
SCN2BO60939 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SCN2BO60939 ANKRD20A7P-201ENST00000402318 2414 ntBASIC12.86□□□□□ -0.35
SCN2BO60939 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC12.86□□□□□ -0.35
SCN2BO60939 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
SCN2BO60939 FAM86MP-201ENST00000340703 885 ntBASIC12.86□□□□□ -0.35
SCN2BO60939 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SCN2BO60939 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
SCN2BO60939 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC12.86□□□□□ -0.35
SCN2BO60939 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SCN2BO60939 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SCN2BO60939 DEF8-202ENST00000418391 852 ntTSL 2 BASIC12.86□□□□□ -0.35
SCN2BO60939 PTPA-217ENST00000434095 870 ntTSL 2 BASIC12.86□□□□□ -0.35
SCN2BO60939 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
SCN2BO60939 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
SCN2BO60939 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC12.86□□□□□ -0.35
SCN2BO60939 HIST2H2BC-201ENST00000498492 580 ntBASIC12.86□□□□□ -0.35
SCN2BO60939 AC008723.1-201ENST00000506922 207 ntBASIC12.86□□□□□ -0.35
SCN2BO60939 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC12.86□□□□□ -0.35
SCN2BO60939 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
SCN2BO60939 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC12.86□□□□□ -0.35
SCN2BO60939 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
SCN2BO60939 IRF3-215ENST00000596822 823 ntTSL 3 BASIC12.86□□□□□ -0.35
SCN2BO60939 SIGLEC18P-201ENST00000602271 909 ntBASIC12.86□□□□□ -0.35
SCN2BO60939 AL591926.3-201ENST00000611630 238 ntBASIC12.86□□□□□ -0.35
SCN2BO60939 AC091544.8-201ENST00000619490 361 ntBASIC12.86□□□□□ -0.35
SCN2BO60939 CMC2-224ENST00000630396 481 ntTSL 5 BASIC12.86□□□□□ -0.35
SCN2BO60939 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC12.86□□□□□ -0.35
SCN2BO60939 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC12.86□□□□□ -0.35
SCN2BO60939 WDR60-202ENST00000407559 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SCN2BO60939 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC12.86□□□□□ -0.35
SCN2BO60939 GLB1L-203ENST00000409640 2042 ntTSL 2 BASIC12.86□□□□□ -0.35
SCN2BO60939 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SCN2BO60939 RBPJ-203ENST00000345843 1682 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SCN2BO60939 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
SCN2BO60939 ZNF318-201ENST00000361428 8006 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SCN2BO60939 PARP10-203ENST00000524918 3469 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
SCN2BO60939 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC12.86□□□□□ -0.35
SCN2BO60939 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC12.86□□□□□ -0.35
SCN2BO60939 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SCN2BO60939 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SCN2BO60939 SPICE1-201ENST00000295872 5417 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SCN2BO60939 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SCN2BO60939 DGKZ-216ENST00000528615 2692 ntTSL 5 BASIC12.85□□□□□ -0.35
SCN2BO60939 BIVM-202ENST00000448849 3198 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SCN2BO60939 PRKAB1-206ENST00000541640 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SCN2BO60939 ARHGEF3-213ENST00000496106 1994 ntTSL 2 BASIC12.85□□□□□ -0.35
SCN2BO60939 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SCN2BO60939 AC027369.3-201ENST00000530465 3707 ntBASIC12.85□□□□□ -0.35
SCN2BO60939 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SCN2BO60939 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms