Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SHKBP1Q8TBC3 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
SHKBP1Q8TBC3 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
SHKBP1Q8TBC3 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC14.22□□□□□ -0.13
SHKBP1Q8TBC3 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SHKBP1Q8TBC3 AC064850.1-201ENST00000413279 1398 ntBASIC14.22□□□□□ -0.13
SHKBP1Q8TBC3 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC14.21□□□□□ -0.13
SHKBP1Q8TBC3 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SHKBP1Q8TBC3 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SHKBP1Q8TBC3 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SHKBP1Q8TBC3 FAM153C-201ENST00000398106 1510 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
SHKBP1Q8TBC3 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC14.21□□□□□ -0.13
SHKBP1Q8TBC3 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.21□□□□□ -0.13
SHKBP1Q8TBC3 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.13
SHKBP1Q8TBC3 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
SHKBP1Q8TBC3 AC125807.2-201ENST00000513358 3514 ntBASIC14.21□□□□□ -0.13
SHKBP1Q8TBC3 AC024075.2-201ENST00000598112 1473 ntBASIC14.21□□□□□ -0.13
SHKBP1Q8TBC3 CR382285.1-201ENST00000625012 1485 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SHKBP1Q8TBC3 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SHKBP1Q8TBC3 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
SHKBP1Q8TBC3 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
SHKBP1Q8TBC3 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SHKBP1Q8TBC3 CHEK2-203ENST00000382565 696 ntTSL 5 BASIC14.21□□□□□ -0.13
SHKBP1Q8TBC3 PPM1N-203ENST00000396737 872 ntTSL 2 BASIC14.21□□□□□ -0.13
SHKBP1Q8TBC3 MPV17-209ENST00000405983 859 ntTSL 5 BASIC14.21□□□□□ -0.13
SHKBP1Q8TBC3 OR7E155P-201ENST00000412208 1014 ntBASIC14.21□□□□□ -0.13
SHKBP1Q8TBC3 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC14.21□□□□□ -0.13
SHKBP1Q8TBC3 AL356417.1-201ENST00000421161 845 ntTSL 3 BASIC14.21□□□□□ -0.13
SHKBP1Q8TBC3 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC14.21□□□□□ -0.13
SHKBP1Q8TBC3 AL136084.1-201ENST00000449172 318 ntBASIC14.21□□□□□ -0.13
SHKBP1Q8TBC3 AL390961.2-201ENST00000454991 472 ntTSL 3 BASIC14.21□□□□□ -0.13
SHKBP1Q8TBC3 POLR3G-207ENST00000514483 682 ntTSL 3 BASIC14.21□□□□□ -0.13
SHKBP1Q8TBC3 AC078852.1-201ENST00000515842 441 ntTSL 3 BASIC14.21□□□□□ -0.13
SHKBP1Q8TBC3 AC103736.1-201ENST00000524410 605 ntTSL 3 BASIC14.21□□□□□ -0.13
SHKBP1Q8TBC3 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SHKBP1Q8TBC3 AC087741.1-204ENST00000573935 646 ntTSL 3 BASIC14.21□□□□□ -0.13
SHKBP1Q8TBC3 HNRNPA1P16-201ENST00000575692 955 ntBASIC14.21□□□□□ -0.13
SHKBP1Q8TBC3 AC093503.1-201ENST00000593888 495 ntTSL 3 BASIC14.21□□□□□ -0.13
SHKBP1Q8TBC3 AC007193.3-201ENST00000598616 188 ntTSL 3 BASIC14.21□□□□□ -0.13
SHKBP1Q8TBC3 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC14.21□□□□□ -0.13
SHKBP1Q8TBC3 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SHKBP1Q8TBC3 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SHKBP1Q8TBC3 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SHKBP1Q8TBC3 NCLP1-201ENST00000445357 1963 ntBASIC14.21□□□□□ -0.13
SHKBP1Q8TBC3 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
SHKBP1Q8TBC3 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SHKBP1Q8TBC3 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SHKBP1Q8TBC3 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.14
SHKBP1Q8TBC3 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SHKBP1Q8TBC3 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SHKBP1Q8TBC3 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SHKBP1Q8TBC3 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.14
SHKBP1Q8TBC3 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
SHKBP1Q8TBC3 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SHKBP1Q8TBC3 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
SHKBP1Q8TBC3 COASY-202ENST00000421097 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SHKBP1Q8TBC3 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC14.21□□□□□ -0.14
SHKBP1Q8TBC3 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SHKBP1Q8TBC3 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC14.21□□□□□ -0.14
SHKBP1Q8TBC3 TCL1A-201ENST00000402399 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SHKBP1Q8TBC3 HRH2-202ENST00000377291 2561 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
SHKBP1Q8TBC3 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
SHKBP1Q8TBC3 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
SHKBP1Q8TBC3 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
SHKBP1Q8TBC3 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SHKBP1Q8TBC3 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SHKBP1Q8TBC3 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
SHKBP1Q8TBC3 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SHKBP1Q8TBC3 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
SHKBP1Q8TBC3 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SHKBP1Q8TBC3 ERP29-202ENST00000455836 1333 ntTSL 2 BASIC14.2□□□□□ -0.14
SHKBP1Q8TBC3 TAGLN3-205ENST00000478951 1301 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SHKBP1Q8TBC3 DAO-208ENST00000551281 1345 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SHKBP1Q8TBC3 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
SHKBP1Q8TBC3 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
SHKBP1Q8TBC3 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SHKBP1Q8TBC3 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SHKBP1Q8TBC3 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
SHKBP1Q8TBC3 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SHKBP1Q8TBC3 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SHKBP1Q8TBC3 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SHKBP1Q8TBC3 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SHKBP1Q8TBC3 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
SHKBP1Q8TBC3 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SHKBP1Q8TBC3 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SHKBP1Q8TBC3 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SHKBP1Q8TBC3 FCN2-202ENST00000350339 943 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
SHKBP1Q8TBC3 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SHKBP1Q8TBC3 CDRT15L2-201ENST00000399044 1048 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
SHKBP1Q8TBC3 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SHKBP1Q8TBC3 SLC12A9-AS1-201ENST00000412754 369 ntTSL 3 BASIC14.2□□□□□ -0.14
SHKBP1Q8TBC3 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SHKBP1Q8TBC3 CDCA4P4-201ENST00000435216 680 ntBASIC14.2□□□□□ -0.14
SHKBP1Q8TBC3 LINC00399-201ENST00000439008 414 ntTSL 2 BASIC14.2□□□□□ -0.14
SHKBP1Q8TBC3 AL662797.1-201ENST00000442852 799 ntTSL 3 BASIC14.2□□□□□ -0.14
SHKBP1Q8TBC3 AC133141.1-201ENST00000443015 339 ntBASIC14.2□□□□□ -0.14
SHKBP1Q8TBC3 AC019118.1-201ENST00000454530 435 ntTSL 3 BASIC14.2□□□□□ -0.14
SHKBP1Q8TBC3 AC005845.1-201ENST00000539206 653 ntTSL 3 BASIC14.2□□□□□ -0.14
SHKBP1Q8TBC3 WNT5B-206ENST00000542408 508 ntTSL 3 BASIC14.2□□□□□ -0.14
SHKBP1Q8TBC3 AC018845.3-201ENST00000562536 516 ntTSL 3 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms