Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CASP4P49662 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC14.76□□□□□ -0.05
CASP4P49662 AL031687.1-201ENST00000450586 2137 ntTSL 2 BASIC14.76□□□□□ -0.05
CASP4P49662 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC14.76□□□□□ -0.05
CASP4P49662 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CASP4P49662 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC14.76□□□□□ -0.05
CASP4P49662 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC14.76□□□□□ -0.05
CASP4P49662 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC14.76□□□□□ -0.05
CASP4P49662 AC007998.2-201ENST00000589258 455 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
CASP4P49662 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC14.76□□□□□ -0.05
CASP4P49662 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
CASP4P49662 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CASP4P49662 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CASP4P49662 CCDC3-202ENST00000378839 3180 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
CASP4P49662 LAIR1-204ENST00000391743 2735 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
CASP4P49662 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CASP4P49662 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CASP4P49662 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CASP4P49662 CA6-205ENST00000480186 1493 ntTSL 2 BASIC14.76□□□□□ -0.05
CASP4P49662 ANKDD1A-207ENST00000496660 1477 ntTSL 2 BASIC14.76□□□□□ -0.05
CASP4P49662 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CASP4P49662 APOL2-203ENST00000451256 1421 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
CASP4P49662 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CASP4P49662 CPA5-203ENST00000461828 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CASP4P49662 PARP10-203ENST00000524918 3469 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
CASP4P49662 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
CASP4P49662 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CASP4P49662 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CASP4P49662 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC14.75□□□□□ -0.05
CASP4P49662 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CASP4P49662 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
CASP4P49662 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CASP4P49662 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC14.75□□□□□ -0.05
CASP4P49662 CLEC10A-202ENST00000416562 1646 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
CASP4P49662 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC14.75□□□□□ -0.05
CASP4P49662 AC009123.1-202ENST00000565643 2551 ntTSL 2 BASIC14.75□□□□□ -0.05
CASP4P49662 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CASP4P49662 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CASP4P49662 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CASP4P49662 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CASP4P49662 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CASP4P49662 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CASP4P49662 ABCD1P4-201ENST00000399687 604 ntBASIC14.75□□□□□ -0.05
CASP4P49662 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
CASP4P49662 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC14.75□□□□□ -0.05
CASP4P49662 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC14.75□□□□□ -0.05
CASP4P49662 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC14.75□□□□□ -0.05
CASP4P49662 AL390961.2-201ENST00000454991 472 ntTSL 3 BASIC14.75□□□□□ -0.05
CASP4P49662 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC14.75□□□□□ -0.05
CASP4P49662 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
CASP4P49662 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CASP4P49662 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
CASP4P49662 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CASP4P49662 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
CASP4P49662 GPR55-205ENST00000622008 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CASP4P49662 PSG8-AS1-201ENST00000425668 1873 ntTSL 2 BASIC14.75□□□□□ -0.05
CASP4P49662 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CASP4P49662 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CASP4P49662 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CASP4P49662 MCM2-201ENST00000265056 3622 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CASP4P49662 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CASP4P49662 IP6K2-201ENST00000328631 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CASP4P49662 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CASP4P49662 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CASP4P49662 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CASP4P49662 C2-209ENST00000452323 1999 ntTSL 2 BASIC14.74□□□□□ -0.05
CASP4P49662 MCF2L-213ENST00000421756 3560 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CASP4P49662 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CASP4P49662 AL391097.1-201ENST00000432706 1620 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CASP4P49662 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CASP4P49662 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CASP4P49662 RHOH-222ENST00000617441 1872 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CASP4P49662 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CASP4P49662 TTC4-201ENST00000371281 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CASP4P49662 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CASP4P49662 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CASP4P49662 SERF2-204ENST00000402131 586 ntTSL 2 BASIC14.74□□□□□ -0.05
CASP4P49662 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC14.74□□□□□ -0.05
CASP4P49662 SLC12A9-AS1-201ENST00000412754 369 ntTSL 3 BASIC14.74□□□□□ -0.05
CASP4P49662 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CASP4P49662 AC004837.1-201ENST00000446267 564 ntBASIC14.74□□□□□ -0.05
CASP4P49662 IL2RG-204ENST00000456850 540 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CASP4P49662 RPL29P2-202ENST00000498671 657 ntBASIC14.74□□□□□ -0.05
CASP4P49662 RPS23-204ENST00000507980 836 ntTSL 2 BASIC14.74□□□□□ -0.05
CASP4P49662 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CASP4P49662 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CASP4P49662 LINC02376-201ENST00000536330 724 ntTSL 3 BASIC14.74□□□□□ -0.05
CASP4P49662 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CASP4P49662 COQ4-204ENST00000608951 781 ntTSL 2 BASIC14.74□□□□□ -0.05
CASP4P49662 COX6A1P2-201ENST00000620597 330 ntBASIC14.74□□□□□ -0.05
CASP4P49662 AC002044.2-201ENST00000624910 970 ntBASIC14.74□□□□□ -0.05
CASP4P49662 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC14.74□□□□□ -0.05
CASP4P49662 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC14.74□□□□□ -0.05
CASP4P49662 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CASP4P49662 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
CASP4P49662 SERPING1-203ENST00000378323 1733 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
CASP4P49662 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CASP4P49662 TNRC6B-203ENST00000402203 3444 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CASP4P49662 AGAP4-203ENST00000448048 2439 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CASP4P49662 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms