Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
COL15A1P39059 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
COL15A1P39059 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL15A1P39059 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL15A1P39059 FAM183BP-201ENST00000409072 1595 ntBASIC16.84■□□□□ 0.29
COL15A1P39059 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL15A1P39059 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
COL15A1P39059 TUBB8P5-201ENST00000445286 1351 ntBASIC16.84■□□□□ 0.29
COL15A1P39059 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL15A1P39059 FARS2-201ENST00000274680 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL15A1P39059 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL15A1P39059 FER1L4-210ENST00000615531 5998 ntBASIC16.84■□□□□ 0.29
COL15A1P39059 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL15A1P39059 DCAF13-201ENST00000297579 2642 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
COL15A1P39059 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
COL15A1P39059 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
COL15A1P39059 GRP-201ENST00000256857 848 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL15A1P39059 IZUMO1R-201ENST00000328458 798 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
COL15A1P39059 NPPB-201ENST00000376468 694 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL15A1P39059 NAA10-205ENST00000393712 908 ntTSL 5 BASIC16.84■□□□□ 0.29
COL15A1P39059 IGSF23-201ENST00000402988 989 ntAPPRIS P2 TSL 3 BASIC16.84■□□□□ 0.29
COL15A1P39059 ZNF589-202ENST00000412564 593 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
COL15A1P39059 LINC01693-202ENST00000430123 357 ntTSL 3 BASIC16.84■□□□□ 0.29
COL15A1P39059 AKR1C6P-201ENST00000432950 983 ntBASIC16.84■□□□□ 0.29
COL15A1P39059 CA5BP1-205ENST00000435806 1064 ntBASIC16.84■□□□□ 0.29
COL15A1P39059 AP000959.1-201ENST00000441759 977 ntTSL 3 BASIC16.84■□□□□ 0.29
COL15A1P39059 PRSS45-201ENST00000442359 687 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
COL15A1P39059 DMKN-244ENST00000480502 820 ntAPPRIS ALT2 TSL 3 BASIC16.84■□□□□ 0.29
COL15A1P39059 HNRNPA1P55-201ENST00000505935 955 ntBASIC16.84■□□□□ 0.29
COL15A1P39059 CCNL2P1-201ENST00000512846 969 ntBASIC16.84■□□□□ 0.29
COL15A1P39059 CCDC42-202ENST00000539522 1087 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
COL15A1P39059 TMEM241-208ENST00000542162 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL15A1P39059 AC027682.3-201ENST00000564717 207 ntTSL 5 BASIC16.84■□□□□ 0.29
COL15A1P39059 DSCAS-201ENST00000581836 553 ntTSL 4 BASIC16.84■□□□□ 0.29
COL15A1P39059 AC112220.4-201ENST00000604982 1263 ntBASIC16.84■□□□□ 0.29
COL15A1P39059 AL591926.3-201ENST00000611630 238 ntBASIC16.84■□□□□ 0.29
COL15A1P39059 MRPS31P4-202ENST00000613769 583 ntTSL 4 BASIC16.84■□□□□ 0.29
COL15A1P39059 AC245427.1-201ENST00000633705 760 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
COL15A1P39059 AL592295.3-201ENST00000637155 863 ntTSL 5 BASIC16.84■□□□□ 0.29
COL15A1P39059 LINC00643-207ENST00000637212 734 ntBASIC16.84■□□□□ 0.29
COL15A1P39059 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
COL15A1P39059 GLT6D1-201ENST00000371763 1526 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL15A1P39059 GLT6D1-202ENST00000613244 1523 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
COL15A1P39059 AL359915.2-202ENST00000440150 2469 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
COL15A1P39059 ZFAND1-201ENST00000220669 1798 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL15A1P39059 ZFAND1-221ENST00000523096 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL15A1P39059 MBIP-211ENST00000621657 1809 ntTSL 5 BASIC16.84■□□□□ 0.29
COL15A1P39059 CD1A-201ENST00000289429 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL15A1P39059 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
COL15A1P39059 SLC4A11-207ENST00000539553 2832 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
COL15A1P39059 EGLN3-205ENST00000547327 2849 ntBASIC16.84■□□□□ 0.29
COL15A1P39059 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
COL15A1P39059 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
COL15A1P39059 AC004623.1-201ENST00000624592 2127 ntBASIC16.84■□□□□ 0.29
COL15A1P39059 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
COL15A1P39059 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
COL15A1P39059 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC16.83■□□□□ 0.29
COL15A1P39059 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.29
COL15A1P39059 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
COL15A1P39059 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
COL15A1P39059 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
COL15A1P39059 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
COL15A1P39059 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
COL15A1P39059 SERPING1-202ENST00000340687 1719 ntTSL 5 BASIC16.83■□□□□ 0.29
COL15A1P39059 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC16.83■□□□□ 0.29
COL15A1P39059 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
COL15A1P39059 CPA5-203ENST00000461828 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
COL15A1P39059 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
COL15A1P39059 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
COL15A1P39059 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
COL15A1P39059 NOBOX-201ENST00000467773 2076 ntTSL 5 BASIC16.83■□□□□ 0.28
COL15A1P39059 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
COL15A1P39059 RPS7-202ENST00000403564 764 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
COL15A1P39059 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
COL15A1P39059 AC078882.1-201ENST00000436132 416 ntTSL 2 BASIC16.83■□□□□ 0.28
COL15A1P39059 TRBV11-2-201ENST00000471935 408 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
COL15A1P39059 ALDOAP1-201ENST00000491506 1078 ntBASIC16.83■□□□□ 0.28
COL15A1P39059 AC090820.1-201ENST00000519722 591 ntBASIC16.83■□□□□ 0.28
COL15A1P39059 GOLGA2P10-201ENST00000550961 817 ntBASIC16.83■□□□□ 0.28
COL15A1P39059 NSRP1-213ENST00000584423 482 ntTSL 2 BASIC16.83■□□□□ 0.28
COL15A1P39059 CYP1B1-AS1-204ENST00000589303 579 ntTSL 5 BASIC16.83■□□□□ 0.28
COL15A1P39059 AC005332.2-201ENST00000590010 930 ntBASIC16.83■□□□□ 0.28
COL15A1P39059 PSME2-217ENST00000615264 874 ntTSL 5 BASIC16.83■□□□□ 0.28
COL15A1P39059 AC134878.2-201ENST00000620700 1265 ntBASIC16.83■□□□□ 0.28
COL15A1P39059 PSME2-218ENST00000630027 185 ntTSL 3 BASIC16.83■□□□□ 0.28
COL15A1P39059 FRG2EP-201ENST00000634243 835 ntBASIC16.83■□□□□ 0.28
COL15A1P39059 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
COL15A1P39059 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
COL15A1P39059 AC005519.2-201ENST00000554532 1367 ntTSL 4 BASIC16.83■□□□□ 0.28
COL15A1P39059 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
COL15A1P39059 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC16.83■□□□□ 0.28
COL15A1P39059 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
COL15A1P39059 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
COL15A1P39059 AC012531.1-201ENST00000562848 2680 ntBASIC16.83■□□□□ 0.28
COL15A1P39059 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
COL15A1P39059 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC16.83■□□□□ 0.28
COL15A1P39059 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
COL15A1P39059 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
COL15A1P39059 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
COL15A1P39059 ITGB1BP1-201ENST00000238091 1772 ntTSL 3 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms