Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 PIK3R5-220ENST00000623421 4318 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
HLA-DRB4X5D2U9 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
HLA-DRB4X5D2U9 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC10.32□□□□□ -0.76
HLA-DRB4X5D2U9 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
HLA-DRB4X5D2U9 MIEF2-201ENST00000323019 3364 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
HLA-DRB4X5D2U9 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
HLA-DRB4X5D2U9 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
HLA-DRB4X5D2U9 AC138761.6-201ENST00000583997 1423 ntBASIC10.32□□□□□ -0.76
HLA-DRB4X5D2U9 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
HLA-DRB4X5D2U9 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC10.32□□□□□ -0.76
HLA-DRB4X5D2U9 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
HLA-DRB4X5D2U9 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
HLA-DRB4X5D2U9 ZNF493-208ENST00000599461 1769 ntBASIC10.31□□□□□ -0.76
HLA-DRB4X5D2U9 NFKB1-202ENST00000394820 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
HLA-DRB4X5D2U9 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
HLA-DRB4X5D2U9 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
HLA-DRB4X5D2U9 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC10.31□□□□□ -0.76
HLA-DRB4X5D2U9 CACNA1G-211ENST00000503485 6768 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
HLA-DRB4X5D2U9 AGAP12P-201ENST00000585227 2359 ntBASIC10.31□□□□□ -0.76
HLA-DRB4X5D2U9 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
HLA-DRB4X5D2U9 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
HLA-DRB4X5D2U9 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
HLA-DRB4X5D2U9 AC125807.2-201ENST00000513358 3514 ntBASIC10.31□□□□□ -0.76
HLA-DRB4X5D2U9 KCNMA1-285ENST00000640605 3864 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
HLA-DRB4X5D2U9 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC10.31□□□□□ -0.76
HLA-DRB4X5D2U9 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC10.31□□□□□ -0.76
HLA-DRB4X5D2U9 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC10.31□□□□□ -0.76
HLA-DRB4X5D2U9 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC10.31□□□□□ -0.76
HLA-DRB4X5D2U9 DDC-204ENST00000426377 1700 ntTSL 3 BASIC10.31□□□□□ -0.76
HLA-DRB4X5D2U9 SLC25A17-217ENST00000544408 2060 ntTSL 2 BASIC10.31□□□□□ -0.76
HLA-DRB4X5D2U9 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
HLA-DRB4X5D2U9 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
HLA-DRB4X5D2U9 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
HLA-DRB4X5D2U9 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC10.31□□□□□ -0.76
HLA-DRB4X5D2U9 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
HLA-DRB4X5D2U9 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
HLA-DRB4X5D2U9 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
HLA-DRB4X5D2U9 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC10.31□□□□□ -0.76
HLA-DRB4X5D2U9 OR2K2-202ENST00000374428 1038 ntBASIC10.31□□□□□ -0.76
HLA-DRB4X5D2U9 AL662890.1-201ENST00000396818 632 ntBASIC10.31□□□□□ -0.76
HLA-DRB4X5D2U9 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC10.31□□□□□ -0.76
HLA-DRB4X5D2U9 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC10.31□□□□□ -0.76
HLA-DRB4X5D2U9 RPL8P2-201ENST00000430538 502 ntBASIC10.31□□□□□ -0.76
HLA-DRB4X5D2U9 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC10.31□□□□□ -0.76
HLA-DRB4X5D2U9 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC10.31□□□□□ -0.76
HLA-DRB4X5D2U9 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC10.31□□□□□ -0.76
HLA-DRB4X5D2U9 TSACC-208ENST00000481479 741 ntTSL 2 BASIC10.31□□□□□ -0.76
HLA-DRB4X5D2U9 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC10.31□□□□□ -0.76
HLA-DRB4X5D2U9 SUPT4H1P2-201ENST00000501248 353 ntBASIC10.31□□□□□ -0.76
HLA-DRB4X5D2U9 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC10.31□□□□□ -0.76
HLA-DRB4X5D2U9 AC245884.6-201ENST00000515672 1067 ntBASIC10.31□□□□□ -0.76
HLA-DRB4X5D2U9 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC10.31□□□□□ -0.76
HLA-DRB4X5D2U9 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC10.31□□□□□ -0.76
HLA-DRB4X5D2U9 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC10.31□□□□□ -0.76
HLA-DRB4X5D2U9 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC10.31□□□□□ -0.76
HLA-DRB4X5D2U9 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC10.31□□□□□ -0.76
HLA-DRB4X5D2U9 RN7SL574P-201ENST00000581512 297 ntBASIC10.31□□□□□ -0.76
HLA-DRB4X5D2U9 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC10.31□□□□□ -0.76
HLA-DRB4X5D2U9 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC10.31□□□□□ -0.76
HLA-DRB4X5D2U9 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC10.31□□□□□ -0.76
HLA-DRB4X5D2U9 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
HLA-DRB4X5D2U9 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC10.31□□□□□ -0.76
HLA-DRB4X5D2U9 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC10.31□□□□□ -0.76
HLA-DRB4X5D2U9 ANKRD20A1-201ENST00000562196 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
HLA-DRB4X5D2U9 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
HLA-DRB4X5D2U9 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
HLA-DRB4X5D2U9 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC10.31□□□□□ -0.76
HLA-DRB4X5D2U9 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
HLA-DRB4X5D2U9 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
HLA-DRB4X5D2U9 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
HLA-DRB4X5D2U9 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
HLA-DRB4X5D2U9 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
HLA-DRB4X5D2U9 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
HLA-DRB4X5D2U9 SLC4A1-201ENST00000262418 4965 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
HLA-DRB4X5D2U9 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
HLA-DRB4X5D2U9 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
HLA-DRB4X5D2U9 ABCA3-202ENST00000382381 6446 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
HLA-DRB4X5D2U9 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
HLA-DRB4X5D2U9 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
HLA-DRB4X5D2U9 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
HLA-DRB4X5D2U9 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC10.31□□□□□ -0.76
HLA-DRB4X5D2U9 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
HLA-DRB4X5D2U9 PPP1R12A-201ENST00000261207 5582 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
HLA-DRB4X5D2U9 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
HLA-DRB4X5D2U9 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
HLA-DRB4X5D2U9 AC012531.1-201ENST00000562848 2680 ntBASIC10.3□□□□□ -0.76
HLA-DRB4X5D2U9 RNF165-202ENST00000543885 4852 ntTSL 2 BASIC10.3□□□□□ -0.76
HLA-DRB4X5D2U9 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
HLA-DRB4X5D2U9 PI4KAP2-201ENST00000360806 2080 ntBASIC10.3□□□□□ -0.76
HLA-DRB4X5D2U9 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
HLA-DRB4X5D2U9 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC10.3□□□□□ -0.76
HLA-DRB4X5D2U9 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
HLA-DRB4X5D2U9 PLCB3-201ENST00000279230 4197 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
HLA-DRB4X5D2U9 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
HLA-DRB4X5D2U9 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
HLA-DRB4X5D2U9 PES1P2-201ENST00000449745 1735 ntBASIC10.3□□□□□ -0.76
HLA-DRB4X5D2U9 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
HLA-DRB4X5D2U9 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC10.3□□□□□ -0.76
HLA-DRB4X5D2U9 AC022400.8-201ENST00000623453 3599 ntBASIC10.3□□□□□ -0.76
HLA-DRB4X5D2U9 SNX33-201ENST00000308527 8008 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms