Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 CMIP-208ENST00000566462 3512 ntTSL 4 BASIC13.44□□□□□ -0.26
SATB2Q9UPW6 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SATB2Q9UPW6 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SATB2Q9UPW6 KCNJ5-202ENST00000529694 5940 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SATB2Q9UPW6 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC13.44□□□□□ -0.26
SATB2Q9UPW6 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
SATB2Q9UPW6 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC13.44□□□□□ -0.26
SATB2Q9UPW6 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
SATB2Q9UPW6 ZEB2-234ENST00000636413 8984 ntTSL 5 BASIC13.43□□□□□ -0.26
SATB2Q9UPW6 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
SATB2Q9UPW6 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SATB2Q9UPW6 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SATB2Q9UPW6 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SATB2Q9UPW6 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SATB2Q9UPW6 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SATB2Q9UPW6 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SATB2Q9UPW6 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SATB2Q9UPW6 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC13.43□□□□□ -0.26
SATB2Q9UPW6 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC13.43□□□□□ -0.26
SATB2Q9UPW6 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SATB2Q9UPW6 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
SATB2Q9UPW6 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
SATB2Q9UPW6 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SATB2Q9UPW6 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SATB2Q9UPW6 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SATB2Q9UPW6 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.43□□□□□ -0.26
SATB2Q9UPW6 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC13.43□□□□□ -0.26
SATB2Q9UPW6 AL096772.1-201ENST00000451135 781 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SATB2Q9UPW6 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
SATB2Q9UPW6 SLC25A15P3-201ENST00000505530 290 ntBASIC13.43□□□□□ -0.26
SATB2Q9UPW6 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
SATB2Q9UPW6 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SATB2Q9UPW6 FOXN3-AS2-201ENST00000554071 1262 ntBASIC13.43□□□□□ -0.26
SATB2Q9UPW6 AL132994.1-201ENST00000554098 400 ntBASIC13.43□□□□□ -0.26
SATB2Q9UPW6 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC13.43□□□□□ -0.26
SATB2Q9UPW6 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SATB2Q9UPW6 SRP14-204ENST00000558720 780 ntTSL 2 BASIC13.43□□□□□ -0.26
SATB2Q9UPW6 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC13.43□□□□□ -0.26
SATB2Q9UPW6 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
SATB2Q9UPW6 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SATB2Q9UPW6 AL160191.2-201ENST00000603975 601 ntBASIC13.43□□□□□ -0.26
SATB2Q9UPW6 HPX-213ENST00000615166 826 ntTSL 5 BASIC13.43□□□□□ -0.26
SATB2Q9UPW6 TP53-221ENST00000615910 1149 ntTSL 5 BASIC13.43□□□□□ -0.26
SATB2Q9UPW6 CACNA1G-226ENST00000513689 6879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
SATB2Q9UPW6 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
SATB2Q9UPW6 CACNA1G-231ENST00000515165 6870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
SATB2Q9UPW6 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SATB2Q9UPW6 MTMR3-202ENST00000333027 8906 ntTSL 5 BASIC13.43□□□□□ -0.26
SATB2Q9UPW6 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SATB2Q9UPW6 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
SATB2Q9UPW6 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC13.43□□□□□ -0.26
SATB2Q9UPW6 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SATB2Q9UPW6 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SATB2Q9UPW6 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SATB2Q9UPW6 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC13.43□□□□□ -0.26
SATB2Q9UPW6 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
SATB2Q9UPW6 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
SATB2Q9UPW6 AC089987.1-201ENST00000551654 2209 ntBASIC13.43□□□□□ -0.26
SATB2Q9UPW6 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
SATB2Q9UPW6 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
SATB2Q9UPW6 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SATB2Q9UPW6 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC13.43□□□□□ -0.26
SATB2Q9UPW6 FOXK1-201ENST00000328914 11181 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
SATB2Q9UPW6 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC13.43□□□□□ -0.26
SATB2Q9UPW6 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
SATB2Q9UPW6 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SATB2Q9UPW6 PDXDC2P-206ENST00000534700 1315 ntBASIC13.42□□□□□ -0.26
SATB2Q9UPW6 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SATB2Q9UPW6 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
SATB2Q9UPW6 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC13.42□□□□□ -0.26
SATB2Q9UPW6 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
SATB2Q9UPW6 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC13.42□□□□□ -0.26
SATB2Q9UPW6 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
SATB2Q9UPW6 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
SATB2Q9UPW6 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC13.42□□□□□ -0.26
SATB2Q9UPW6 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
SATB2Q9UPW6 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC13.42□□□□□ -0.26
SATB2Q9UPW6 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
SATB2Q9UPW6 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC13.42□□□□□ -0.26
SATB2Q9UPW6 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC13.42□□□□□ -0.26
SATB2Q9UPW6 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC13.42□□□□□ -0.26
SATB2Q9UPW6 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SATB2Q9UPW6 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC13.42□□□□□ -0.26
SATB2Q9UPW6 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SATB2Q9UPW6 ACTBP7-201ENST00000418351 1124 ntBASIC13.42□□□□□ -0.26
SATB2Q9UPW6 AC092573.1-201ENST00000433054 884 ntBASIC13.42□□□□□ -0.26
SATB2Q9UPW6 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC13.42□□□□□ -0.26
SATB2Q9UPW6 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC13.42□□□□□ -0.26
SATB2Q9UPW6 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
SATB2Q9UPW6 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SATB2Q9UPW6 AC083801.1-201ENST00000491689 358 ntBASIC13.42□□□□□ -0.26
SATB2Q9UPW6 PRSS3P1-201ENST00000503996 742 ntBASIC13.42□□□□□ -0.26
SATB2Q9UPW6 EEF1GP8-201ENST00000506566 1154 ntBASIC13.42□□□□□ -0.26
SATB2Q9UPW6 AC106047.2-201ENST00000511723 743 ntBASIC13.42□□□□□ -0.26
SATB2Q9UPW6 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC13.42□□□□□ -0.26
SATB2Q9UPW6 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC13.42□□□□□ -0.26
SATB2Q9UPW6 KRT18P37-201ENST00000520711 1282 ntBASIC13.42□□□□□ -0.26
SATB2Q9UPW6 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
SATB2Q9UPW6 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC13.42□□□□□ -0.26
SATB2Q9UPW6 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC13.42□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms