Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 C12orf66-201ENST00000311915 2698 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
VGLL1Q99990 TRMT61A-202ENST00000389749 3229 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
VGLL1Q99990 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC10.39□□□□□ -0.75
VGLL1Q99990 DNAJC30-201ENST00000395176 2485 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
VGLL1Q99990 DRD2-210ENST00000544518 2473 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.75
VGLL1Q99990 FER1L5-207ENST00000641731 6294 ntAPPRIS ALT2 BASIC10.38□□□□□ -0.75
VGLL1Q99990 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC10.38□□□□□ -0.75
VGLL1Q99990 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
VGLL1Q99990 CHMP4C-201ENST00000297265 1866 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
VGLL1Q99990 KIR3DL1-203ENST00000391728 1871 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
VGLL1Q99990 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
VGLL1Q99990 HOXB13-201ENST00000290295 3467 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
VGLL1Q99990 ZNF564-201ENST00000339282 2935 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
VGLL1Q99990 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
VGLL1Q99990 ZFYVE19-215ENST00000570108 1669 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
VGLL1Q99990 ESRRB-201ENST00000380887 2745 ntTSL 5 BASIC10.38□□□□□ -0.75
VGLL1Q99990 CACNA1C-213ENST00000399629 6562 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
VGLL1Q99990 UAP1L1-201ENST00000360271 3201 ntTSL 2 BASIC10.38□□□□□ -0.75
VGLL1Q99990 C9orf170-201ENST00000623052 3239 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
VGLL1Q99990 ADAM32-206ENST00000519315 2168 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
VGLL1Q99990 AC007336.3-201ENST00000623886 2160 ntBASIC10.38□□□□□ -0.75
VGLL1Q99990 AL031432.4-201ENST00000641729 2190 ntBASIC10.38□□□□□ -0.75
VGLL1Q99990 FN1-202ENST00000336916 8435 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
VGLL1Q99990 GAPDHS-201ENST00000222286 1489 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
VGLL1Q99990 AL353608.3-202ENST00000429953 4384 ntTSL 5 BASIC10.38□□□□□ -0.75
VGLL1Q99990 NAA60-214ENST00000572584 2450 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
VGLL1Q99990 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
VGLL1Q99990 INTS13-201ENST00000261191 2974 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
VGLL1Q99990 AC079776.1-201ENST00000401540 1152 ntBASIC10.38□□□□□ -0.75
VGLL1Q99990 MIR663B-201ENST00000408361 115 ntBASIC10.38□□□□□ -0.75
VGLL1Q99990 BX679664.3-201ENST00000414070 555 ntBASIC10.38□□□□□ -0.75
VGLL1Q99990 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
VGLL1Q99990 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC10.38□□□□□ -0.75
VGLL1Q99990 ACA64.2-201ENST00000459014 129 ntBASIC10.38□□□□□ -0.75
VGLL1Q99990 AC113935.1-201ENST00000471722 555 ntBASIC10.38□□□□□ -0.75
VGLL1Q99990 KLHL24-211ENST00000476808 2126 ntTSL 2 BASIC10.38□□□□□ -0.75
VGLL1Q99990 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC10.38□□□□□ -0.75
VGLL1Q99990 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
VGLL1Q99990 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC10.38□□□□□ -0.75
VGLL1Q99990 ALG1L13P-202ENST00000519320 584 ntBASIC10.38□□□□□ -0.75
VGLL1Q99990 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC10.38□□□□□ -0.75
VGLL1Q99990 AP005482.1-201ENST00000563722 1273 ntBASIC10.38□□□□□ -0.75
VGLL1Q99990 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC10.38□□□□□ -0.75
VGLL1Q99990 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC10.38□□□□□ -0.75
VGLL1Q99990 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC10.38□□□□□ -0.75
VGLL1Q99990 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC10.38□□□□□ -0.75
VGLL1Q99990 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
VGLL1Q99990 AC007663.3-201ENST00000609632 465 ntBASIC10.38□□□□□ -0.75
VGLL1Q99990 AC091271.1-201ENST00000611877 1162 ntBASIC10.38□□□□□ -0.75
VGLL1Q99990 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC10.38□□□□□ -0.75
VGLL1Q99990 AL136295.7-201ENST00000619226 1200 ntBASIC10.38□□□□□ -0.75
VGLL1Q99990 H1FX-AS1-201ENST00000383461 2600 ntTSL 2 BASIC10.38□□□□□ -0.75
VGLL1Q99990 AC139795.2-201ENST00000499900 1751 ntTSL 2 BASIC10.38□□□□□ -0.75
VGLL1Q99990 TPO-202ENST00000345913 3145 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
VGLL1Q99990 KCNIP3-202ENST00000360990 2798 ntTSL 5 BASIC10.38□□□□□ -0.75
VGLL1Q99990 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
VGLL1Q99990 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
VGLL1Q99990 MSH6-214ENST00000616033 3429 ntTSL 5 BASIC10.38□□□□□ -0.75
VGLL1Q99990 DNMT1-203ENST00000540357 4916 ntTSL 5 BASIC10.38□□□□□ -0.75
VGLL1Q99990 ZNF799-202ENST00000430385 2583 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
VGLL1Q99990 PTPRN2-203ENST00000389418 4706 ntAPPRIS P4 TSL 1 (best) BASIC10.38□□□□□ -0.75
VGLL1Q99990 SLIT2-204ENST00000504154 6390 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
VGLL1Q99990 TRPC7-201ENST00000352189 2241 ntTSL 5 BASIC10.38□□□□□ -0.75
VGLL1Q99990 CSF3R-201ENST00000331941 2375 ntTSL 5 BASIC10.38□□□□□ -0.75
VGLL1Q99990 C1QTNF9-202ENST00000382071 1854 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
VGLL1Q99990 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
VGLL1Q99990 ZSCAN32-203ENST00000396852 3169 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
VGLL1Q99990 GJB5-201ENST00000338513 1355 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
VGLL1Q99990 SLC4A11-207ENST00000539553 2832 ntAPPRIS ALT2 TSL 2 BASIC10.38□□□□□ -0.75
VGLL1Q99990 RPS15A-213ENST00000576436 2190 ntTSL 4 BASIC10.38□□□□□ -0.75
VGLL1Q99990 GLP1R-201ENST00000373256 3105 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
VGLL1Q99990 TNK1-201ENST00000570896 3122 ntAPPRIS P3 TSL 5 BASIC10.38□□□□□ -0.75
VGLL1Q99990 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
VGLL1Q99990 TGM3-201ENST00000381458 2642 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
VGLL1Q99990 ITFG1-204ENST00000544001 1849 ntTSL 2 BASIC10.37□□□□□ -0.75
VGLL1Q99990 FAM86C1-202ENST00000359244 2110 ntAPPRIS ALT2 TSL 2 BASIC10.37□□□□□ -0.75
VGLL1Q99990 PARD6B-201ENST00000371610 4615 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
VGLL1Q99990 AC026992.2-203ENST00000563004 2419 ntBASIC10.37□□□□□ -0.75
VGLL1Q99990 NR1H3-217ENST00000467728 2731 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
VGLL1Q99990 FAM131B-204ENST00000409578 4286 ntTSL 5 BASIC10.37□□□□□ -0.75
VGLL1Q99990 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
VGLL1Q99990 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC10.37□□□□□ -0.75
VGLL1Q99990 CCDC3-202ENST00000378839 3180 ntAPPRIS ALT2 TSL 2 BASIC10.37□□□□□ -0.75
VGLL1Q99990 TAX1BP1-207ENST00000433216 3174 ntTSL 2 BASIC10.37□□□□□ -0.75
VGLL1Q99990 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
VGLL1Q99990 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC10.37□□□□□ -0.75
VGLL1Q99990 TNFSF8-201ENST00000223795 1906 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
VGLL1Q99990 ZMPSTE24-201ENST00000372759 3108 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
VGLL1Q99990 RNA5SP359-201ENST00000364838 113 ntBASIC10.37□□□□□ -0.75
VGLL1Q99990 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC10.37□□□□□ -0.75
VGLL1Q99990 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
VGLL1Q99990 NCBP1-202ENST00000375147 5178 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
VGLL1Q99990 SLC6A4-203ENST00000401766 6543 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
VGLL1Q99990 BTBD6P1-201ENST00000412176 1267 ntBASIC10.37□□□□□ -0.75
VGLL1Q99990 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
VGLL1Q99990 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
VGLL1Q99990 AC116345.2-201ENST00000512837 523 ntBASIC10.37□□□□□ -0.75
VGLL1Q99990 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
VGLL1Q99990 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC10.37□□□□□ -0.75
VGLL1Q99990 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC10.37□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms