Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
LMO3Q8TAP4 ETAA1-201ENST00000272342 3418 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LMO3Q8TAP4 PSMC4-201ENST00000157812 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LMO3Q8TAP4 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
LMO3Q8TAP4 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC14.42□□□□□ -0.1
LMO3Q8TAP4 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
LMO3Q8TAP4 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LMO3Q8TAP4 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC14.42□□□□□ -0.1
LMO3Q8TAP4 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
LMO3Q8TAP4 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
LMO3Q8TAP4 TRMT61A-202ENST00000389749 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LMO3Q8TAP4 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LMO3Q8TAP4 RUSC1-AS1-202ENST00000446880 1836 ntTSL 2 BASIC14.41□□□□□ -0.1
LMO3Q8TAP4 MIR600HG-201ENST00000449175 5984 ntBASIC14.41□□□□□ -0.1
LMO3Q8TAP4 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
LMO3Q8TAP4 RHOH-219ENST00000614836 2114 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
LMO3Q8TAP4 TBC1D3F-201ENST00000620210 2117 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
LMO3Q8TAP4 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LMO3Q8TAP4 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LMO3Q8TAP4 PRKAB1-206ENST00000541640 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LMO3Q8TAP4 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LMO3Q8TAP4 FAM156B-201ENST00000416841 2537 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LMO3Q8TAP4 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC14.41□□□□□ -0.1
LMO3Q8TAP4 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LMO3Q8TAP4 AKNA-203ENST00000312033 3334 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LMO3Q8TAP4 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LMO3Q8TAP4 PRDX1-202ENST00000319248 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LMO3Q8TAP4 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LMO3Q8TAP4 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LMO3Q8TAP4 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LMO3Q8TAP4 PSAT1P2-201ENST00000426107 972 ntBASIC14.41□□□□□ -0.1
LMO3Q8TAP4 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC14.41□□□□□ -0.1
LMO3Q8TAP4 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC14.41□□□□□ -0.1
LMO3Q8TAP4 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC14.41□□□□□ -0.1
LMO3Q8TAP4 RPL7P35-201ENST00000446943 740 ntBASIC14.41□□□□□ -0.1
LMO3Q8TAP4 GNG10P1-201ENST00000452289 199 ntBASIC14.41□□□□□ -0.1
LMO3Q8TAP4 PFN2-212ENST00000490975 858 ntTSL 4 BASIC14.41□□□□□ -0.1
LMO3Q8TAP4 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LMO3Q8TAP4 FOXN3-AS2-201ENST00000554071 1262 ntBASIC14.41□□□□□ -0.1
LMO3Q8TAP4 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LMO3Q8TAP4 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
LMO3Q8TAP4 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC14.41□□□□□ -0.1
LMO3Q8TAP4 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
LMO3Q8TAP4 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LMO3Q8TAP4 ADPRH-202ENST00000465513 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LMO3Q8TAP4 MRFAP1L1-201ENST00000320848 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LMO3Q8TAP4 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LMO3Q8TAP4 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LMO3Q8TAP4 CYP11B1-203ENST00000377675 2280 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LMO3Q8TAP4 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LMO3Q8TAP4 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC14.41□□□□□ -0.1
LMO3Q8TAP4 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LMO3Q8TAP4 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
LMO3Q8TAP4 ZNF564-201ENST00000339282 2935 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LMO3Q8TAP4 LIN28B-203ENST00000637759 2635 ntTSL 5 BASIC14.41□□□□□ -0.1
LMO3Q8TAP4 AL390066.1-201ENST00000456414 2302 ntTSL 2 BASIC14.41□□□□□ -0.1
LMO3Q8TAP4 GLB1L-203ENST00000409640 2042 ntTSL 2 BASIC14.41□□□□□ -0.1
LMO3Q8TAP4 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
LMO3Q8TAP4 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
LMO3Q8TAP4 YY1AP1-205ENST00000355499 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
LMO3Q8TAP4 CLCNKB-202ENST00000375679 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LMO3Q8TAP4 ARHGEF9-203ENST00000374872 2364 ntTSL 2 BASIC14.4□□□□□ -0.1
LMO3Q8TAP4 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
LMO3Q8TAP4 RNF34-203ENST00000392465 2051 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
LMO3Q8TAP4 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC14.4□□□□□ -0.1
LMO3Q8TAP4 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
LMO3Q8TAP4 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC14.4□□□□□ -0.1
LMO3Q8TAP4 DDX11L1-202ENST00000456328 1657 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LMO3Q8TAP4 DDX11L10-202ENST00000513886 1652 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LMO3Q8TAP4 DDX11L9-203ENST00000562189 1652 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LMO3Q8TAP4 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LMO3Q8TAP4 L3MBTL1-202ENST00000373134 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
LMO3Q8TAP4 CTAGE10P-201ENST00000318353 2408 ntBASIC14.4□□□□□ -0.1
LMO3Q8TAP4 IKBKB-218ENST00000520835 2403 ntTSL 2 BASIC14.4□□□□□ -0.1
LMO3Q8TAP4 STT3A-211ENST00000529196 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LMO3Q8TAP4 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
LMO3Q8TAP4 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
LMO3Q8TAP4 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
LMO3Q8TAP4 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LMO3Q8TAP4 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
LMO3Q8TAP4 FLAD1-202ENST00000295530 1211 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LMO3Q8TAP4 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
LMO3Q8TAP4 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LMO3Q8TAP4 CHEK2-203ENST00000382565 696 ntTSL 5 BASIC14.4□□□□□ -0.1
LMO3Q8TAP4 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LMO3Q8TAP4 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
LMO3Q8TAP4 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC14.4□□□□□ -0.1
LMO3Q8TAP4 RPSAP31-201ENST00000416648 895 ntBASIC14.4□□□□□ -0.1
LMO3Q8TAP4 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC14.4□□□□□ -0.1
LMO3Q8TAP4 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC14.4□□□□□ -0.1
LMO3Q8TAP4 SRP19-206ENST00000515463 660 ntTSL 3 BASIC14.4□□□□□ -0.1
LMO3Q8TAP4 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LMO3Q8TAP4 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC14.4□□□□□ -0.1
LMO3Q8TAP4 AC013553.1-201ENST00000560906 267 ntBASIC14.4□□□□□ -0.1
LMO3Q8TAP4 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC14.4□□□□□ -0.1
LMO3Q8TAP4 MIR6858-201ENST00000620733 67 ntBASIC14.4□□□□□ -0.1
LMO3Q8TAP4 CRABP2-204ENST00000621784 1033 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
LMO3Q8TAP4 AC026336.4-201ENST00000624565 1050 ntBASIC14.4□□□□□ -0.1
LMO3Q8TAP4 AC022098.1-201ENST00000588387 2861 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LMO3Q8TAP4 ACKR1-202ENST00000368122 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 227.3 ms