Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 RPS15P5-201ENST00000449885 432 ntBASIC16.65■□□□□ 0.26
RC3H1Q5TC82 AL355987.2-201ENST00000471502 561 ntTSL 4 BASIC16.65■□□□□ 0.26
RC3H1Q5TC82 ASS1P9-201ENST00000513426 1236 ntBASIC16.65■□□□□ 0.26
RC3H1Q5TC82 NOSIP-204ENST00000596358 1005 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RC3H1Q5TC82 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC16.65■□□□□ 0.26
RC3H1Q5TC82 MRPL34-206ENST00000602206 603 ntTSL 3 BASIC16.65■□□□□ 0.26
RC3H1Q5TC82 AC016526.4-201ENST00000636059 517 ntTSL 3 BASIC16.65■□□□□ 0.26
RC3H1Q5TC82 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RC3H1Q5TC82 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RC3H1Q5TC82 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RC3H1Q5TC82 AC068418.2-201ENST00000577309 3703 ntBASIC16.65■□□□□ 0.26
RC3H1Q5TC82 AC023830.3-201ENST00000612995 1455 ntBASIC16.65■□□□□ 0.26
RC3H1Q5TC82 NXPE4-201ENST00000375478 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RC3H1Q5TC82 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
RC3H1Q5TC82 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RC3H1Q5TC82 XYLB-203ENST00000427323 1666 ntTSL 2 BASIC16.65■□□□□ 0.26
RC3H1Q5TC82 CHRNA1-208ENST00000636168 1862 ntTSL 5 BASIC16.65■□□□□ 0.26
RC3H1Q5TC82 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
RC3H1Q5TC82 DRD3-201ENST00000295881 1541 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
RC3H1Q5TC82 AC004471.2-201ENST00000609936 1514 ntTSL 3 BASIC16.65■□□□□ 0.26
RC3H1Q5TC82 PAX6-255ENST00000639386 1723 ntTSL 5 BASIC16.65■□□□□ 0.26
RC3H1Q5TC82 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC16.65■□□□□ 0.26
RC3H1Q5TC82 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RC3H1Q5TC82 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RC3H1Q5TC82 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC16.64■□□□□ 0.25
RC3H1Q5TC82 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.64■□□□□ 0.25
RC3H1Q5TC82 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RC3H1Q5TC82 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
RC3H1Q5TC82 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RC3H1Q5TC82 AL359845.1-201ENST00000458202 1648 ntBASIC16.64■□□□□ 0.25
RC3H1Q5TC82 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.64■□□□□ 0.25
RC3H1Q5TC82 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RC3H1Q5TC82 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RC3H1Q5TC82 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RC3H1Q5TC82 TPT1-201ENST00000309246 1008 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RC3H1Q5TC82 IGHV1-45-201ENST00000390621 411 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
RC3H1Q5TC82 B3GALNT1-204ENST00000417187 1107 ntTSL 2 BASIC16.64■□□□□ 0.25
RC3H1Q5TC82 AL049792.1-201ENST00000424708 1262 ntBASIC16.64■□□□□ 0.25
RC3H1Q5TC82 AL161644.1-201ENST00000426901 1111 ntTSL 2 BASIC16.64■□□□□ 0.25
RC3H1Q5TC82 HLA-DRB6-202ENST00000437183 1090 ntBASIC16.64■□□□□ 0.25
RC3H1Q5TC82 RN7SL111P-201ENST00000468841 285 ntBASIC16.64■□□□□ 0.25
RC3H1Q5TC82 RN7SL87P-201ENST00000497657 288 ntBASIC16.64■□□□□ 0.25
RC3H1Q5TC82 AL139353.1-202ENST00000547378 474 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
RC3H1Q5TC82 SNHG21-205ENST00000561107 790 ntTSL 2 BASIC16.64■□□□□ 0.25
RC3H1Q5TC82 RPSAP67-201ENST00000584105 862 ntBASIC16.64■□□□□ 0.25
RC3H1Q5TC82 AD000091.1-201ENST00000592379 287 ntBASIC16.64■□□□□ 0.25
RC3H1Q5TC82 AC087893.1-201ENST00000612818 664 ntBASIC16.64■□□□□ 0.25
RC3H1Q5TC82 LINC00963-217ENST00000624009 663 ntTSL 5 BASIC16.64■□□□□ 0.25
RC3H1Q5TC82 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RC3H1Q5TC82 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC16.64■□□□□ 0.25
RC3H1Q5TC82 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
RC3H1Q5TC82 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RC3H1Q5TC82 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
RC3H1Q5TC82 SLC5A11-211ENST00000569071 1919 ntTSL 5 BASIC16.64■□□□□ 0.25
RC3H1Q5TC82 SLC2A14-205ENST00000535295 1732 ntTSL 2 BASIC16.64■□□□□ 0.25
RC3H1Q5TC82 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC16.64■□□□□ 0.25
RC3H1Q5TC82 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RC3H1Q5TC82 AC099689.1-201ENST00000624383 1302 ntBASIC16.64■□□□□ 0.25
RC3H1Q5TC82 AC109326.1-201ENST00000624705 1321 ntBASIC16.64■□□□□ 0.25
RC3H1Q5TC82 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
RC3H1Q5TC82 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC16.64■□□□□ 0.25
RC3H1Q5TC82 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RC3H1Q5TC82 TAF7L-202ENST00000356784 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RC3H1Q5TC82 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC16.63■□□□□ 0.25
RC3H1Q5TC82 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC16.63■□□□□ 0.25
RC3H1Q5TC82 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RC3H1Q5TC82 NIT1-202ENST00000368008 2081 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RC3H1Q5TC82 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RC3H1Q5TC82 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RC3H1Q5TC82 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC16.63■□□□□ 0.25
RC3H1Q5TC82 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RC3H1Q5TC82 LDLRAD1-203ENST00000420619 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RC3H1Q5TC82 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
RC3H1Q5TC82 AC108024.1-201ENST00000626286 1721 ntBASIC16.63■□□□□ 0.25
RC3H1Q5TC82 PARK7-204ENST00000377493 795 ntTSL 2 BASIC16.63■□□□□ 0.25
RC3H1Q5TC82 AL357833.1-201ENST00000413993 832 ntTSL 3 BASIC16.63■□□□□ 0.25
RC3H1Q5TC82 RPL19P20-201ENST00000415648 591 ntBASIC16.63■□□□□ 0.25
RC3H1Q5TC82 FAM138A-201ENST00000417324 1187 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RC3H1Q5TC82 AL359094.2-201ENST00000420941 750 ntTSL 3 BASIC16.63■□□□□ 0.25
RC3H1Q5TC82 AL359458.1-201ENST00000430821 400 ntTSL 3 BASIC16.63■□□□□ 0.25
RC3H1Q5TC82 FAM138D-201ENST00000504074 1187 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RC3H1Q5TC82 FAM138E-201ENST00000507796 1187 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RC3H1Q5TC82 AC022447.2-201ENST00000509750 543 ntTSL 3 BASIC16.63■□□□□ 0.25
RC3H1Q5TC82 BCRP5-201ENST00000514371 253 ntBASIC16.63■□□□□ 0.25
RC3H1Q5TC82 SSSCA1-203ENST00000526877 713 ntTSL 3 BASIC16.63■□□□□ 0.25
RC3H1Q5TC82 ZFYVE1-206ENST00000555072 1225 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RC3H1Q5TC82 FOS-205ENST00000555242 629 ntTSL 2 BASIC16.63■□□□□ 0.25
RC3H1Q5TC82 AC106782.3-201ENST00000563429 258 ntBASIC16.63■□□□□ 0.25
RC3H1Q5TC82 AL390726.3-201ENST00000567428 635 ntTSL 5 BASIC16.63■□□□□ 0.25
RC3H1Q5TC82 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC16.63■□□□□ 0.25
RC3H1Q5TC82 Z93930.2-203ENST00000585003 516 ntBASIC16.63■□□□□ 0.25
RC3H1Q5TC82 SNHG5-211ENST00000587692 1029 ntTSL 3 BASIC16.63■□□□□ 0.25
RC3H1Q5TC82 Metazoa_SRP.68-201ENST00000612673 282 ntBASIC16.63■□□□□ 0.25
RC3H1Q5TC82 AC097634.2-201ENST00000615819 604 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RC3H1Q5TC82 NPL-205ENST00000367555 1536 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RC3H1Q5TC82 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
RC3H1Q5TC82 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RC3H1Q5TC82 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
RC3H1Q5TC82 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
RC3H1Q5TC82 SIGLEC20P-201ENST00000595243 1311 ntBASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms