Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC13.53□□□□□ -0.24
CSNK1DP48730 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CSNK1DP48730 TMEM182-202ENST00000409528 3112 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CSNK1DP48730 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CSNK1DP48730 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC13.53□□□□□ -0.24
CSNK1DP48730 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
CSNK1DP48730 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CSNK1DP48730 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC13.53□□□□□ -0.24
CSNK1DP48730 CCDC163-203ENST00000626657 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CSNK1DP48730 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
CSNK1DP48730 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC13.53□□□□□ -0.24
CSNK1DP48730 AC073862.3-201ENST00000624597 1648 ntBASIC13.53□□□□□ -0.24
CSNK1DP48730 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CSNK1DP48730 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
CSNK1DP48730 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CSNK1DP48730 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CSNK1DP48730 ZFAND1-201ENST00000220669 1798 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
CSNK1DP48730 ZFAND1-221ENST00000523096 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CSNK1DP48730 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CSNK1DP48730 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CSNK1DP48730 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CSNK1DP48730 AC007326.2-201ENST00000624224 7579 ntBASIC13.52□□□□□ -0.24
CSNK1DP48730 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
CSNK1DP48730 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CSNK1DP48730 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC13.52□□□□□ -0.24
CSNK1DP48730 STT3A-211ENST00000529196 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CSNK1DP48730 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CSNK1DP48730 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.24
CSNK1DP48730 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
CSNK1DP48730 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CSNK1DP48730 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CSNK1DP48730 SLC25A5-201ENST00000317881 1274 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CSNK1DP48730 RN7SKP255-201ENST00000363442 313 ntBASIC13.52□□□□□ -0.25
CSNK1DP48730 RN7SKP203-201ENST00000363618 332 ntBASIC13.52□□□□□ -0.25
CSNK1DP48730 RN7SKP71-201ENST00000364558 318 ntBASIC13.52□□□□□ -0.25
CSNK1DP48730 7SK.1-201ENST00000365328 331 ntBASIC13.52□□□□□ -0.25
CSNK1DP48730 MIR1301-201ENST00000408518 82 ntBASIC13.52□□□□□ -0.25
CSNK1DP48730 FAM126A-201ENST00000409763 616 ntTSL 2 BASIC13.52□□□□□ -0.25
CSNK1DP48730 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CSNK1DP48730 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CSNK1DP48730 AC024293.1-201ENST00000467930 498 ntBASIC13.52□□□□□ -0.25
CSNK1DP48730 AC026410.1-201ENST00000507366 1101 ntBASIC13.52□□□□□ -0.25
CSNK1DP48730 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC13.52□□□□□ -0.25
CSNK1DP48730 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
CSNK1DP48730 ANAPC15-209ENST00000538919 849 ntAPPRIS P3 TSL 3 BASIC13.52□□□□□ -0.25
CSNK1DP48730 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC13.52□□□□□ -0.25
CSNK1DP48730 CYB5D2-202ENST00000573984 495 ntTSL 4 BASIC13.52□□□□□ -0.25
CSNK1DP48730 NEAT1-204ENST00000612303 572 ntTSL 3 BASIC13.52□□□□□ -0.25
CSNK1DP48730 Metazoa_SRP.153-201ENST00000620153 341 ntBASIC13.52□□□□□ -0.25
CSNK1DP48730 AC127024.7-201ENST00000625101 200 ntBASIC13.52□□□□□ -0.25
CSNK1DP48730 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CSNK1DP48730 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
CSNK1DP48730 AL157832.2-205ENST00000597245 1649 ntBASIC13.52□□□□□ -0.25
CSNK1DP48730 Z98259.1-201ENST00000564261 1697 ntBASIC13.52□□□□□ -0.25
CSNK1DP48730 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
CSNK1DP48730 NAMA-207ENST00000605707 1748 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CSNK1DP48730 NR1H4-203ENST00000392986 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CSNK1DP48730 ATP6V1B1-201ENST00000234396 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CSNK1DP48730 UGT3A1-203ENST00000503189 1902 ntTSL 2 BASIC13.52□□□□□ -0.25
CSNK1DP48730 PPP1R26P2-201ENST00000611403 3595 ntBASIC13.52□□□□□ -0.25
CSNK1DP48730 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CSNK1DP48730 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC13.51□□□□□ -0.25
CSNK1DP48730 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
CSNK1DP48730 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CSNK1DP48730 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CSNK1DP48730 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CSNK1DP48730 RHOH-219ENST00000614836 2114 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
CSNK1DP48730 ENSA-208ENST00000369014 2085 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
CSNK1DP48730 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC13.51□□□□□ -0.25
CSNK1DP48730 ZNF570-202ENST00000586475 1985 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CSNK1DP48730 NDRG2-201ENST00000298684 1784 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CSNK1DP48730 ALDH7A1-234ENST00000637782 1773 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
CSNK1DP48730 CTRL-205ENST00000574481 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CSNK1DP48730 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CSNK1DP48730 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CSNK1DP48730 KRT18P40-201ENST00000599859 1571 ntBASIC13.51□□□□□ -0.25
CSNK1DP48730 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CSNK1DP48730 JPT1-202ENST00000356033 1519 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CSNK1DP48730 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC13.51□□□□□ -0.25
CSNK1DP48730 VPS28-201ENST00000292510 979 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CSNK1DP48730 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
CSNK1DP48730 SIRPB3P-201ENST00000340424 1216 ntBASIC13.51□□□□□ -0.25
CSNK1DP48730 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
CSNK1DP48730 VPS28-202ENST00000377348 1097 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CSNK1DP48730 GEMIN8P4-201ENST00000380526 729 ntBASIC13.51□□□□□ -0.25
CSNK1DP48730 SH3BGR-202ENST00000380631 780 ntTSL 5 BASIC13.51□□□□□ -0.25
CSNK1DP48730 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
CSNK1DP48730 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
CSNK1DP48730 TOMM5-203ENST00000401811 789 ntTSL 2 BASIC13.51□□□□□ -0.25
CSNK1DP48730 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CSNK1DP48730 AL513165.1-201ENST00000413915 289 ntTSL 3 BASIC13.51□□□□□ -0.25
CSNK1DP48730 AC010086.2-201ENST00000428616 226 ntBASIC13.51□□□□□ -0.25
CSNK1DP48730 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC13.51□□□□□ -0.25
CSNK1DP48730 AC024028.1-201ENST00000437145 437 ntTSL 3 BASIC13.51□□□□□ -0.25
CSNK1DP48730 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC13.51□□□□□ -0.25
CSNK1DP48730 SNORA47-201ENST00000458862 138 ntBASIC13.51□□□□□ -0.25
CSNK1DP48730 AL157792.1-201ENST00000488281 530 ntBASIC13.51□□□□□ -0.25
CSNK1DP48730 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC13.51□□□□□ -0.25
CSNK1DP48730 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC13.51□□□□□ -0.25
CSNK1DP48730 AC107959.3-201ENST00000520840 484 ntTSL 5 BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms