Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 OCA2-201ENST00000353809 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SSR1P43307 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC14.6□□□□□ -0.07
SSR1P43307 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
SSR1P43307 ZNF747-201ENST00000252799 3936 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SSR1P43307 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC14.6□□□□□ -0.07
SSR1P43307 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SSR1P43307 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC14.6□□□□□ -0.07
SSR1P43307 RASA4CP-203ENST00000446874 3193 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SSR1P43307 SLC28A1-203ENST00000394573 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SSR1P43307 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SSR1P43307 IYD-208ENST00000500320 2158 ntTSL 2 BASIC14.6□□□□□ -0.07
SSR1P43307 VSTM2A-201ENST00000302287 3401 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SSR1P43307 GOLGA6L4-202ENST00000422563 4155 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
SSR1P43307 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC14.59□□□□□ -0.07
SSR1P43307 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC14.59□□□□□ -0.07
SSR1P43307 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC14.59□□□□□ -0.07
SSR1P43307 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC14.59□□□□□ -0.07
SSR1P43307 TNFRSF21-201ENST00000296861 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SSR1P43307 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
SSR1P43307 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SSR1P43307 NOBOX-201ENST00000467773 2076 ntTSL 5 BASIC14.59□□□□□ -0.07
SSR1P43307 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC14.59□□□□□ -0.07
SSR1P43307 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
SSR1P43307 SLC38A7-215ENST00000570101 4549 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SSR1P43307 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC14.59□□□□□ -0.07
SSR1P43307 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
SSR1P43307 RAB3IP-212ENST00000550536 9646 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SSR1P43307 C15orf40-201ENST00000304177 11244 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SSR1P43307 EXTL2-207ENST00000535414 3146 ntTSL 5 BASIC14.59□□□□□ -0.07
SSR1P43307 RBM10-206ENST00000628161 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
SSR1P43307 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SSR1P43307 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
SSR1P43307 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SSR1P43307 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SSR1P43307 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SSR1P43307 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
SSR1P43307 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
SSR1P43307 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SSR1P43307 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SSR1P43307 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC14.59□□□□□ -0.07
SSR1P43307 AC006033.1-201ENST00000440505 426 ntBASIC14.59□□□□□ -0.07
SSR1P43307 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC14.59□□□□□ -0.07
SSR1P43307 AC116345.2-201ENST00000512837 523 ntBASIC14.59□□□□□ -0.07
SSR1P43307 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC14.59□□□□□ -0.07
SSR1P43307 AL645939.5-201ENST00000606834 243 ntBASIC14.59□□□□□ -0.07
SSR1P43307 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC14.59□□□□□ -0.07
SSR1P43307 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC14.59□□□□□ -0.07
SSR1P43307 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC14.59□□□□□ -0.07
SSR1P43307 TPX2-202ENST00000340513 3605 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SSR1P43307 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SSR1P43307 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SSR1P43307 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SSR1P43307 METAP1-201ENST00000296411 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SSR1P43307 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
SSR1P43307 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
SSR1P43307 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC14.59□□□□□ -0.07
SSR1P43307 NME1-209ENST00000511355 1645 ntTSL 5 BASIC14.59□□□□□ -0.07
SSR1P43307 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
SSR1P43307 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
SSR1P43307 RGS6-203ENST00000402788 5400 ntTSL 2 BASIC14.59□□□□□ -0.07
SSR1P43307 FREM3-201ENST00000329798 6729 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
SSR1P43307 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC14.59□□□□□ -0.07
SSR1P43307 DAPK1-201ENST00000358077 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SSR1P43307 SLC35A4-203ENST00000612662 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SSR1P43307 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.07
SSR1P43307 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
SSR1P43307 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC14.58□□□□□ -0.07
SSR1P43307 AC015921.1-201ENST00000574885 2546 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
SSR1P43307 ST3GAL1-211ENST00000522652 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SSR1P43307 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC14.58□□□□□ -0.08
SSR1P43307 PHF19-202ENST00000373896 4241 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
SSR1P43307 ZFHX2-202ENST00000419474 9182 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
SSR1P43307 WNK1-209ENST00000537687 11232 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
SSR1P43307 ADARB1-214ENST00000629643 4583 ntTSL 5 BASIC14.58□□□□□ -0.08
SSR1P43307 FBXW8-202ENST00000455858 4648 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SSR1P43307 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC14.58□□□□□ -0.08
SSR1P43307 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SSR1P43307 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SSR1P43307 C10orf90-202ENST00000356858 2995 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
SSR1P43307 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SSR1P43307 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SSR1P43307 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
SSR1P43307 LBH-202ENST00000401506 485 ntTSL 3 BASIC14.58□□□□□ -0.08
SSR1P43307 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC14.58□□□□□ -0.08
SSR1P43307 AC016700.1-201ENST00000429424 312 ntBASIC14.58□□□□□ -0.08
SSR1P43307 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SSR1P43307 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SSR1P43307 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC14.58□□□□□ -0.08
SSR1P43307 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SSR1P43307 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC14.58□□□□□ -0.08
SSR1P43307 AL356740.1-201ENST00000602192 1297 ntBASIC14.58□□□□□ -0.08
SSR1P43307 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
SSR1P43307 MIR6769A-201ENST00000617340 73 ntBASIC14.58□□□□□ -0.08
SSR1P43307 ARHGEF2-206ENST00000462460 4438 ntTSL 5 BASIC14.58□□□□□ -0.08
SSR1P43307 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SSR1P43307 EHMT2-203ENST00000375537 3965 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
SSR1P43307 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC14.58□□□□□ -0.08
SSR1P43307 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC14.58□□□□□ -0.08
SSR1P43307 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SSR1P43307 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms