Protein–RNA interactions for Protein: P11686

SFTPC, Pulmonary surfactant-associated protein C, humanhuman

Predictions only

Length 197 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPCP11686 CPA1-207ENST00000484324 1303 ntTSL 5 BASIC12.37□□□□□ -0.43
SFTPCP11686 SIGLEC20P-201ENST00000595243 1311 ntBASIC12.37□□□□□ -0.43
SFTPCP11686 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC12.37□□□□□ -0.43
SFTPCP11686 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC12.37□□□□□ -0.43
SFTPCP11686 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
SFTPCP11686 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SFTPCP11686 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC12.37□□□□□ -0.43
SFTPCP11686 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SFTPCP11686 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC12.37□□□□□ -0.43
SFTPCP11686 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
SFTPCP11686 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC12.37□□□□□ -0.43
SFTPCP11686 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SFTPCP11686 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SFTPCP11686 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SFTPCP11686 SPOCK3-207ENST00000504953 2900 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
SFTPCP11686 PCP2-201ENST00000311069 776 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
SFTPCP11686 RBP4-203ENST00000371469 814 ntTSL 5 BASIC12.37□□□□□ -0.43
SFTPCP11686 CST11-202ENST00000377009 554 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SFTPCP11686 MARCKSL1P2-201ENST00000401037 976 ntBASIC12.37□□□□□ -0.43
SFTPCP11686 CYCS-203ENST00000409764 799 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
SFTPCP11686 PLAC9P1-203ENST00000440031 223 ntBASIC12.37□□□□□ -0.43
SFTPCP11686 RN7SL2-201ENST00000490232 300 ntBASIC12.37□□□□□ -0.43
SFTPCP11686 LINC02376-201ENST00000536330 724 ntTSL 3 BASIC12.37□□□□□ -0.43
SFTPCP11686 AC079601.2-201ENST00000547729 775 ntBASIC12.37□□□□□ -0.43
SFTPCP11686 EEF1AKMT3-203ENST00000548256 561 ntTSL 4 BASIC12.37□□□□□ -0.43
SFTPCP11686 AC136698.1-201ENST00000558110 546 ntTSL 4 BASIC12.37□□□□□ -0.43
SFTPCP11686 AC048382.4-201ENST00000559065 546 ntTSL 4 BASIC12.37□□□□□ -0.43
SFTPCP11686 BMS1P8-203ENST00000567036 614 ntTSL 3 BASIC12.37□□□□□ -0.43
SFTPCP11686 MIR3940-201ENST00000579148 102 ntBASIC12.37□□□□□ -0.43
SFTPCP11686 RN7SL4P-201ENST00000584058 295 ntBASIC12.37□□□□□ -0.43
SFTPCP11686 AC063977.2-201ENST00000601996 421 ntBASIC12.37□□□□□ -0.43
SFTPCP11686 MIR6893-201ENST00000613458 69 ntBASIC12.37□□□□□ -0.43
SFTPCP11686 AF013593.1-201ENST00000458074 1487 ntBASIC12.37□□□□□ -0.43
SFTPCP11686 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SFTPCP11686 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
SFTPCP11686 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC12.37□□□□□ -0.43
SFTPCP11686 IYD-208ENST00000500320 2158 ntTSL 2 BASIC12.37□□□□□ -0.43
SFTPCP11686 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC12.37□□□□□ -0.43
SFTPCP11686 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
SFTPCP11686 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC12.37□□□□□ -0.43
SFTPCP11686 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SFTPCP11686 ZNF286B-205ENST00000545289 5328 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
SFTPCP11686 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
SFTPCP11686 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SFTPCP11686 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
SFTPCP11686 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC12.37□□□□□ -0.43
SFTPCP11686 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SFTPCP11686 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SFTPCP11686 AL022313.4-201ENST00000562756 2046 ntBASIC12.37□□□□□ -0.43
SFTPCP11686 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SFTPCP11686 BPIFB1-201ENST00000253354 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SFTPCP11686 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
SFTPCP11686 CYP2B6-202ENST00000593831 1426 ntTSL 2 BASIC12.37□□□□□ -0.43
SFTPCP11686 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SFTPCP11686 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC12.36□□□□□ -0.43
SFTPCP11686 ALDH8A1-203ENST00000367845 2383 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SFTPCP11686 LINC00894-206ENST00000450989 2361 ntTSL 2 BASIC12.36□□□□□ -0.43
SFTPCP11686 HIST2H2BE-201ENST00000369155 2194 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
SFTPCP11686 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC12.36□□□□□ -0.43
SFTPCP11686 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
SFTPCP11686 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC12.36□□□□□ -0.43
SFTPCP11686 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
SFTPCP11686 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SFTPCP11686 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SFTPCP11686 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SFTPCP11686 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
SFTPCP11686 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
SFTPCP11686 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SFTPCP11686 AC012485.1-201ENST00000456601 2509 ntTSL 2 BASIC12.36□□□□□ -0.43
SFTPCP11686 WNT8A-202ENST00000398754 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SFTPCP11686 CELP-203ENST00000624767 2414 ntTSL 5 BASIC12.36□□□□□ -0.43
SFTPCP11686 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SFTPCP11686 C1R-201ENST00000535233 2211 ntTSL 2 BASIC12.36□□□□□ -0.43
SFTPCP11686 MED27-202ENST00000357028 1281 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SFTPCP11686 LINC00449-201ENST00000366259 872 ntTSL 2 BASIC12.36□□□□□ -0.43
SFTPCP11686 FUNDC1-201ENST00000378045 1196 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SFTPCP11686 MIR193A-201ENST00000384882 88 ntBASIC12.36□□□□□ -0.43
SFTPCP11686 NAA10-205ENST00000393712 908 ntTSL 5 BASIC12.36□□□□□ -0.43
SFTPCP11686 AC096536.3-201ENST00000415336 575 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SFTPCP11686 AL162151.1-201ENST00000423922 561 ntTSL 4 BASIC12.36□□□□□ -0.43
SFTPCP11686 GAPDHP29-201ENST00000429913 985 ntBASIC12.36□□□□□ -0.43
SFTPCP11686 AL161727.1-201ENST00000457409 530 ntBASIC12.36□□□□□ -0.43
SFTPCP11686 RN7SL677P-201ENST00000466970 319 ntBASIC12.36□□□□□ -0.43
SFTPCP11686 AC139493.2-202ENST00000510155 544 ntTSL 3 BASIC12.36□□□□□ -0.43
SFTPCP11686 AC114939.1-201ENST00000520980 514 ntTSL 5 BASIC12.36□□□□□ -0.43
SFTPCP11686 SNRPF-205ENST00000553192 552 ntTSL 4 BASIC12.36□□□□□ -0.43
SFTPCP11686 LINC00514-203ENST00000573465 313 ntTSL 5 BASIC12.36□□□□□ -0.43
SFTPCP11686 EMP3-204ENST00000596315 761 ntTSL 2 BASIC12.36□□□□□ -0.43
SFTPCP11686 AL589743.3-201ENST00000604121 517 ntBASIC12.36□□□□□ -0.43
SFTPCP11686 GRIA3-208ENST00000620581 2991 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SFTPCP11686 CBR3-AS1-210ENST00000623484 392 ntTSL 5 BASIC12.36□□□□□ -0.43
SFTPCP11686 CBR3-AS1-215ENST00000624086 594 ntTSL 5 BASIC12.36□□□□□ -0.43
SFTPCP11686 DDC-204ENST00000426377 1700 ntTSL 3 BASIC12.36□□□□□ -0.43
SFTPCP11686 AC023509.3-202ENST00000591834 1609 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
SFTPCP11686 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SFTPCP11686 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC12.36□□□□□ -0.43
SFTPCP11686 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
SFTPCP11686 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
SFTPCP11686 TMEM169-202ENST00000406027 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SFTPCP11686 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms