Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
NPIPB4C9JG80 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
NPIPB4C9JG80 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
NPIPB4C9JG80 AL031687.1-201ENST00000450586 2137 ntTSL 2 BASIC11.98□□□□□ -0.49
NPIPB4C9JG80 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC11.98□□□□□ -0.49
NPIPB4C9JG80 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NPIPB4C9JG80 GAS8-201ENST00000268699 3185 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NPIPB4C9JG80 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
NPIPB4C9JG80 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
NPIPB4C9JG80 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC11.97□□□□□ -0.49
NPIPB4C9JG80 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
NPIPB4C9JG80 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
NPIPB4C9JG80 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
NPIPB4C9JG80 SOX30-203ENST00000519442 1666 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
NPIPB4C9JG80 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
NPIPB4C9JG80 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC11.97□□□□□ -0.49
NPIPB4C9JG80 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC11.97□□□□□ -0.49
NPIPB4C9JG80 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC11.97□□□□□ -0.49
NPIPB4C9JG80 KRT18P40-201ENST00000599859 1571 ntBASIC11.97□□□□□ -0.49
NPIPB4C9JG80 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
NPIPB4C9JG80 SCNN1B-202ENST00000343070 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
NPIPB4C9JG80 VOPP1-217ENST00000625836 1400 ntTSL 2 BASIC11.97□□□□□ -0.49
NPIPB4C9JG80 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
NPIPB4C9JG80 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC11.97□□□□□ -0.49
NPIPB4C9JG80 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
NPIPB4C9JG80 TRIB1-203ENST00000520847 1332 ntTSL 2 BASIC11.97□□□□□ -0.49
NPIPB4C9JG80 DHRS7B-202ENST00000395511 2175 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
NPIPB4C9JG80 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
NPIPB4C9JG80 FLAD1-202ENST00000295530 1211 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
NPIPB4C9JG80 U3.5-201ENST00000363448 216 ntBASIC11.97□□□□□ -0.49
NPIPB4C9JG80 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
NPIPB4C9JG80 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
NPIPB4C9JG80 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC11.97□□□□□ -0.49
NPIPB4C9JG80 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
NPIPB4C9JG80 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
NPIPB4C9JG80 SLC12A9-AS1-201ENST00000412754 369 ntTSL 3 BASIC11.97□□□□□ -0.49
NPIPB4C9JG80 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC11.97□□□□□ -0.49
NPIPB4C9JG80 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC11.97□□□□□ -0.49
NPIPB4C9JG80 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
NPIPB4C9JG80 RPS23-204ENST00000507980 836 ntTSL 2 BASIC11.97□□□□□ -0.49
NPIPB4C9JG80 METTL7AP1-201ENST00000547343 496 ntBASIC11.97□□□□□ -0.49
NPIPB4C9JG80 RN7SL470P-201ENST00000583069 259 ntBASIC11.97□□□□□ -0.49
NPIPB4C9JG80 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
NPIPB4C9JG80 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC11.97□□□□□ -0.49
NPIPB4C9JG80 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC11.97□□□□□ -0.49
NPIPB4C9JG80 CSTP2-201ENST00000610599 398 ntBASIC11.97□□□□□ -0.49
NPIPB4C9JG80 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC11.97□□□□□ -0.49
NPIPB4C9JG80 HELLS-212ENST00000630929 400 ntTSL 5 BASIC11.97□□□□□ -0.49
NPIPB4C9JG80 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
NPIPB4C9JG80 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
NPIPB4C9JG80 FBXO5-201ENST00000229758 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
NPIPB4C9JG80 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
NPIPB4C9JG80 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
NPIPB4C9JG80 PRAMEF25-201ENST00000614839 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
NPIPB4C9JG80 PRAMEF26-201ENST00000624207 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
NPIPB4C9JG80 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
NPIPB4C9JG80 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
NPIPB4C9JG80 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC11.97□□□□□ -0.49
NPIPB4C9JG80 SARS2-205ENST00000594171 1631 ntTSL 2 BASIC11.97□□□□□ -0.49
NPIPB4C9JG80 IL12RB1-207ENST00000600835 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
NPIPB4C9JG80 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC11.97□□□□□ -0.49
NPIPB4C9JG80 MRFAP1L1-201ENST00000320848 1593 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
NPIPB4C9JG80 HDGF-203ENST00000368209 2171 ntTSL 2 BASIC11.96□□□□□ -0.49
NPIPB4C9JG80 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
NPIPB4C9JG80 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
NPIPB4C9JG80 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
NPIPB4C9JG80 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
NPIPB4C9JG80 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
NPIPB4C9JG80 MRPS16-202ENST00000372945 2634 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
NPIPB4C9JG80 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
NPIPB4C9JG80 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
NPIPB4C9JG80 CDC45-201ENST00000263201 1976 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
NPIPB4C9JG80 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC11.96□□□□□ -0.49
NPIPB4C9JG80 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC11.96□□□□□ -0.49
NPIPB4C9JG80 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC11.96□□□□□ -0.49
NPIPB4C9JG80 HPGD-204ENST00000504433 1910 ntTSL 2 BASIC11.96□□□□□ -0.49
NPIPB4C9JG80 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
NPIPB4C9JG80 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
NPIPB4C9JG80 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC11.96□□□□□ -0.49
NPIPB4C9JG80 AC111188.1-201ENST00000525758 1833 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
NPIPB4C9JG80 SLIRP-201ENST00000238688 394 ntAPPRIS P3 TSL 2 BASIC11.96□□□□□ -0.49
NPIPB4C9JG80 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
NPIPB4C9JG80 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
NPIPB4C9JG80 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC11.96□□□□□ -0.49
NPIPB4C9JG80 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC11.96□□□□□ -0.49
NPIPB4C9JG80 MRPS12-202ENST00000402029 929 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
NPIPB4C9JG80 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC11.96□□□□□ -0.49
NPIPB4C9JG80 NME6-203ENST00000415644 849 ntTSL 2 BASIC11.96□□□□□ -0.49
NPIPB4C9JG80 ACTG1P19-201ENST00000418987 1116 ntBASIC11.96□□□□□ -0.49
NPIPB4C9JG80 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC11.96□□□□□ -0.49
NPIPB4C9JG80 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
NPIPB4C9JG80 AL118511.1-201ENST00000439341 794 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
NPIPB4C9JG80 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
NPIPB4C9JG80 RN7SL23P-201ENST00000484055 275 ntBASIC11.96□□□□□ -0.49
NPIPB4C9JG80 IGHVII-33-1-201ENST00000524010 280 ntBASIC11.96□□□□□ -0.49
NPIPB4C9JG80 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
NPIPB4C9JG80 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC11.96□□□□□ -0.49
NPIPB4C9JG80 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC11.96□□□□□ -0.49
NPIPB4C9JG80 CES1P2-201ENST00000566467 1242 ntBASIC11.96□□□□□ -0.49
NPIPB4C9JG80 CYB5D2-202ENST00000573984 495 ntTSL 4 BASIC11.96□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms