Protein–RNA interactions for Protein: R4GMX3

COMMD3-BMI1, COMMD3-BMI1 readthrough, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1R4GMX3 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
COMMD3-BMI1R4GMX3 KRT18P10-201ENST00000388836 1287 ntBASIC20.79■□□□□ 0.92
COMMD3-BMI1R4GMX3 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
COMMD3-BMI1R4GMX3 AC009831.1-201ENST00000580420 1582 ntBASIC20.79■□□□□ 0.92
COMMD3-BMI1R4GMX3 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
COMMD3-BMI1R4GMX3 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.78■□□□□ 0.92
COMMD3-BMI1R4GMX3 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.78■□□□□ 0.92
COMMD3-BMI1R4GMX3 AF106564.1-201ENST00000607058 2553 ntBASIC20.78■□□□□ 0.92
COMMD3-BMI1R4GMX3 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COMMD3-BMI1R4GMX3 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
COMMD3-BMI1R4GMX3 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
COMMD3-BMI1R4GMX3 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
COMMD3-BMI1R4GMX3 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
COMMD3-BMI1R4GMX3 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COMMD3-BMI1R4GMX3 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
COMMD3-BMI1R4GMX3 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
COMMD3-BMI1R4GMX3 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
COMMD3-BMI1R4GMX3 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.77■□□□□ 0.92
COMMD3-BMI1R4GMX3 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
COMMD3-BMI1R4GMX3 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
COMMD3-BMI1R4GMX3 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
COMMD3-BMI1R4GMX3 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
COMMD3-BMI1R4GMX3 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
COMMD3-BMI1R4GMX3 ESRRAP2-201ENST00000418437 1549 ntBASIC20.77■□□□□ 0.92
COMMD3-BMI1R4GMX3 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.77■□□□□ 0.92
COMMD3-BMI1R4GMX3 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
COMMD3-BMI1R4GMX3 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.77■□□□□ 0.91
COMMD3-BMI1R4GMX3 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
COMMD3-BMI1R4GMX3 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.76■□□□□ 0.91
COMMD3-BMI1R4GMX3 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
COMMD3-BMI1R4GMX3 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
COMMD3-BMI1R4GMX3 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
COMMD3-BMI1R4GMX3 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
COMMD3-BMI1R4GMX3 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
COMMD3-BMI1R4GMX3 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.76■□□□□ 0.91
COMMD3-BMI1R4GMX3 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
COMMD3-BMI1R4GMX3 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.76■□□□□ 0.91
COMMD3-BMI1R4GMX3 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
COMMD3-BMI1R4GMX3 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
COMMD3-BMI1R4GMX3 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
COMMD3-BMI1R4GMX3 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
COMMD3-BMI1R4GMX3 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
COMMD3-BMI1R4GMX3 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.75■□□□□ 0.91
COMMD3-BMI1R4GMX3 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
COMMD3-BMI1R4GMX3 ABHD17AP3-201ENST00000503096 1137 ntBASIC20.75■□□□□ 0.91
COMMD3-BMI1R4GMX3 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC20.75■□□□□ 0.91
COMMD3-BMI1R4GMX3 RNF126P1-201ENST00000567452 1320 ntBASIC20.75■□□□□ 0.91
COMMD3-BMI1R4GMX3 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
COMMD3-BMI1R4GMX3 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.75■□□□□ 0.91
COMMD3-BMI1R4GMX3 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.75■□□□□ 0.91
COMMD3-BMI1R4GMX3 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
COMMD3-BMI1R4GMX3 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
COMMD3-BMI1R4GMX3 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
COMMD3-BMI1R4GMX3 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
COMMD3-BMI1R4GMX3 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
COMMD3-BMI1R4GMX3 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
COMMD3-BMI1R4GMX3 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC20.74■□□□□ 0.91
COMMD3-BMI1R4GMX3 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.74■□□□□ 0.91
COMMD3-BMI1R4GMX3 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC20.74■□□□□ 0.91
COMMD3-BMI1R4GMX3 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC20.74■□□□□ 0.91
COMMD3-BMI1R4GMX3 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.74■□□□□ 0.91
COMMD3-BMI1R4GMX3 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
COMMD3-BMI1R4GMX3 AC133552.2-201ENST00000619106 1032 ntBASIC20.74■□□□□ 0.91
COMMD3-BMI1R4GMX3 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
COMMD3-BMI1R4GMX3 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
COMMD3-BMI1R4GMX3 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
COMMD3-BMI1R4GMX3 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
COMMD3-BMI1R4GMX3 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COMMD3-BMI1R4GMX3 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
COMMD3-BMI1R4GMX3 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.73■□□□□ 0.91
COMMD3-BMI1R4GMX3 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
COMMD3-BMI1R4GMX3 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COMMD3-BMI1R4GMX3 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COMMD3-BMI1R4GMX3 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COMMD3-BMI1R4GMX3 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
COMMD3-BMI1R4GMX3 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.73■□□□□ 0.91
COMMD3-BMI1R4GMX3 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COMMD3-BMI1R4GMX3 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COMMD3-BMI1R4GMX3 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
COMMD3-BMI1R4GMX3 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
COMMD3-BMI1R4GMX3 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
COMMD3-BMI1R4GMX3 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COMMD3-BMI1R4GMX3 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COMMD3-BMI1R4GMX3 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COMMD3-BMI1R4GMX3 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COMMD3-BMI1R4GMX3 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COMMD3-BMI1R4GMX3 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COMMD3-BMI1R4GMX3 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COMMD3-BMI1R4GMX3 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
COMMD3-BMI1R4GMX3 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
COMMD3-BMI1R4GMX3 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
COMMD3-BMI1R4GMX3 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
COMMD3-BMI1R4GMX3 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
COMMD3-BMI1R4GMX3 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
COMMD3-BMI1R4GMX3 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
COMMD3-BMI1R4GMX3 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
COMMD3-BMI1R4GMX3 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
COMMD3-BMI1R4GMX3 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
COMMD3-BMI1R4GMX3 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
COMMD3-BMI1R4GMX3 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms