Protein–RNA interactions for Protein: Q9Y6Q9

NCOA3, Nuclear receptor coactivator 3, humanhuman

Predictions only

Length 1,424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA3Q9Y6Q9 MDK-213ENST00000617138 635 ntTSL 2 BASIC31.29■■■□□ 2.6
NCOA3Q9Y6Q9 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
NCOA3Q9Y6Q9 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
NCOA3Q9Y6Q9 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
NCOA3Q9Y6Q9 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC31.28■■■□□ 2.6
NCOA3Q9Y6Q9 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC31.28■■■□□ 2.6
NCOA3Q9Y6Q9 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC31.28■■■□□ 2.6
NCOA3Q9Y6Q9 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC31.28■■■□□ 2.6
NCOA3Q9Y6Q9 EI24-204ENST00000527235 1625 ntTSL 5 BASIC31.28■■■□□ 2.6
NCOA3Q9Y6Q9 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC31.27■■■□□ 2.6
NCOA3Q9Y6Q9 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
NCOA3Q9Y6Q9 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
NCOA3Q9Y6Q9 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC31.27■■■□□ 2.6
NCOA3Q9Y6Q9 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
NCOA3Q9Y6Q9 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC31.26■■■□□ 2.6
NCOA3Q9Y6Q9 AC011767.1-201ENST00000617410 1153 ntBASIC31.26■■■□□ 2.6
NCOA3Q9Y6Q9 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC31.26■■■□□ 2.6
NCOA3Q9Y6Q9 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC31.26■■■□□ 2.6
NCOA3Q9Y6Q9 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
NCOA3Q9Y6Q9 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
NCOA3Q9Y6Q9 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC31.25■■■□□ 2.59
NCOA3Q9Y6Q9 APTR-205ENST00000447009 902 ntTSL 2 BASIC31.25■■■□□ 2.59
NCOA3Q9Y6Q9 TSPY20P-201ENST00000450910 630 ntBASIC31.25■■■□□ 2.59
NCOA3Q9Y6Q9 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC31.25■■■□□ 2.59
NCOA3Q9Y6Q9 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
NCOA3Q9Y6Q9 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
NCOA3Q9Y6Q9 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
NCOA3Q9Y6Q9 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
NCOA3Q9Y6Q9 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
NCOA3Q9Y6Q9 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
NCOA3Q9Y6Q9 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC31.24■■■□□ 2.59
NCOA3Q9Y6Q9 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
NCOA3Q9Y6Q9 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC31.24■■■□□ 2.59
NCOA3Q9Y6Q9 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC31.24■■■□□ 2.59
NCOA3Q9Y6Q9 WT1-AS_3.1-201ENST00000613262 234 ntBASIC31.24■■■□□ 2.59
NCOA3Q9Y6Q9 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC31.24■■■□□ 2.59
NCOA3Q9Y6Q9 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
NCOA3Q9Y6Q9 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC31.24■■■□□ 2.59
NCOA3Q9Y6Q9 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
NCOA3Q9Y6Q9 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
NCOA3Q9Y6Q9 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
NCOA3Q9Y6Q9 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC31.24■■■□□ 2.59
NCOA3Q9Y6Q9 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
NCOA3Q9Y6Q9 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
NCOA3Q9Y6Q9 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC31.23■■■□□ 2.59
NCOA3Q9Y6Q9 STX4-202ENST00000394998 1498 ntTSL 2 BASIC31.23■■■□□ 2.59
NCOA3Q9Y6Q9 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC31.23■■■□□ 2.59
NCOA3Q9Y6Q9 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
NCOA3Q9Y6Q9 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
NCOA3Q9Y6Q9 KRT18P6-201ENST00000555540 1265 ntBASIC31.23■■■□□ 2.59
NCOA3Q9Y6Q9 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC31.23■■■□□ 2.59
NCOA3Q9Y6Q9 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC31.22■■■□□ 2.59
NCOA3Q9Y6Q9 AL121749.1-202ENST00000609313 2153 ntBASIC31.22■■■□□ 2.59
NCOA3Q9Y6Q9 AC092803.2-201ENST00000564287 1899 ntBASIC31.22■■■□□ 2.59
NCOA3Q9Y6Q9 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC31.22■■■□□ 2.59
NCOA3Q9Y6Q9 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC31.22■■■□□ 2.59
NCOA3Q9Y6Q9 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
NCOA3Q9Y6Q9 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC31.21■■■□□ 2.59
NCOA3Q9Y6Q9 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
NCOA3Q9Y6Q9 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC31.21■■■□□ 2.59
NCOA3Q9Y6Q9 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
NCOA3Q9Y6Q9 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC31.21■■■□□ 2.59
NCOA3Q9Y6Q9 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
NCOA3Q9Y6Q9 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
NCOA3Q9Y6Q9 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC31.2■■■□□ 2.59
NCOA3Q9Y6Q9 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC31.2■■■□□ 2.59
NCOA3Q9Y6Q9 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC31.2■■■□□ 2.59
NCOA3Q9Y6Q9 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC31.2■■■□□ 2.59
NCOA3Q9Y6Q9 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC31.2■■■□□ 2.59
NCOA3Q9Y6Q9 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
NCOA3Q9Y6Q9 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
NCOA3Q9Y6Q9 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
NCOA3Q9Y6Q9 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC31.2■■■□□ 2.59
NCOA3Q9Y6Q9 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC31.2■■■□□ 2.59
NCOA3Q9Y6Q9 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC31.2■■■□□ 2.59
NCOA3Q9Y6Q9 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
NCOA3Q9Y6Q9 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
NCOA3Q9Y6Q9 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC31.19■■■□□ 2.58
NCOA3Q9Y6Q9 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
NCOA3Q9Y6Q9 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC31.19■■■□□ 2.58
NCOA3Q9Y6Q9 GUSBP6-202ENST00000438529 1198 ntBASIC31.19■■■□□ 2.58
NCOA3Q9Y6Q9 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
NCOA3Q9Y6Q9 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC31.19■■■□□ 2.58
NCOA3Q9Y6Q9 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
NCOA3Q9Y6Q9 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC31.18■■■□□ 2.58
NCOA3Q9Y6Q9 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
NCOA3Q9Y6Q9 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC31.18■■■□□ 2.58
NCOA3Q9Y6Q9 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC31.18■■■□□ 2.58
NCOA3Q9Y6Q9 AL121832.2-201ENST00000610979 668 ntBASIC31.18■■■□□ 2.58
NCOA3Q9Y6Q9 AL050303.2-201ENST00000619798 666 ntBASIC31.18■■■□□ 2.58
NCOA3Q9Y6Q9 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC31.18■■■□□ 2.58
NCOA3Q9Y6Q9 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
NCOA3Q9Y6Q9 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC31.17■■■□□ 2.58
NCOA3Q9Y6Q9 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC31.17■■■□□ 2.58
NCOA3Q9Y6Q9 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC31.17■■■□□ 2.58
NCOA3Q9Y6Q9 BX005040.4-201ENST00000637145 1518 ntBASIC31.17■■■□□ 2.58
NCOA3Q9Y6Q9 TSPY6P-201ENST00000448518 926 ntBASIC31.16■■■□□ 2.58
NCOA3Q9Y6Q9 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC31.16■■■□□ 2.58
NCOA3Q9Y6Q9 RARA-203ENST00000394086 2008 ntTSL 2 BASIC31.16■■■□□ 2.58
NCOA3Q9Y6Q9 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC31.16■■■□□ 2.58
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms