Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 AC092053.2-201ENST00000640557 1818 ntBASIC15.31■□□□□ 0.04
CDC42SE2Q9NRR3 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDC42SE2Q9NRR3 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDC42SE2Q9NRR3 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDC42SE2Q9NRR3 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDC42SE2Q9NRR3 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
CDC42SE2Q9NRR3 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC15.3■□□□□ 0.04
CDC42SE2Q9NRR3 MYB-221ENST00000527615 2381 ntTSL 5 BASIC15.3■□□□□ 0.04
CDC42SE2Q9NRR3 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC15.3■□□□□ 0.04
CDC42SE2Q9NRR3 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
CDC42SE2Q9NRR3 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDC42SE2Q9NRR3 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDC42SE2Q9NRR3 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CDC42SE2Q9NRR3 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC15.29■□□□□ 0.04
CDC42SE2Q9NRR3 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC15.29■□□□□ 0.04
CDC42SE2Q9NRR3 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDC42SE2Q9NRR3 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDC42SE2Q9NRR3 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDC42SE2Q9NRR3 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDC42SE2Q9NRR3 AC139530.1-201ENST00000575312 1977 ntBASIC15.29■□□□□ 0.04
CDC42SE2Q9NRR3 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC15.29■□□□□ 0.04
CDC42SE2Q9NRR3 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDC42SE2Q9NRR3 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDC42SE2Q9NRR3 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDC42SE2Q9NRR3 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDC42SE2Q9NRR3 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDC42SE2Q9NRR3 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC15.29■□□□□ 0.04
CDC42SE2Q9NRR3 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC15.29■□□□□ 0.04
CDC42SE2Q9NRR3 PVT1_1.1-201ENST00000615125 194 ntBASIC15.29■□□□□ 0.04
CDC42SE2Q9NRR3 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDC42SE2Q9NRR3 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC15.29■□□□□ 0.04
CDC42SE2Q9NRR3 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
CDC42SE2Q9NRR3 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDC42SE2Q9NRR3 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDC42SE2Q9NRR3 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDC42SE2Q9NRR3 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDC42SE2Q9NRR3 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
CDC42SE2Q9NRR3 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
CDC42SE2Q9NRR3 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDC42SE2Q9NRR3 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CDC42SE2Q9NRR3 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CDC42SE2Q9NRR3 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDC42SE2Q9NRR3 AC144652.1-201ENST00000609974 1624 ntBASIC15.28■□□□□ 0.04
CDC42SE2Q9NRR3 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC15.28■□□□□ 0.04
CDC42SE2Q9NRR3 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC15.28■□□□□ 0.04
CDC42SE2Q9NRR3 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDC42SE2Q9NRR3 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDC42SE2Q9NRR3 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDC42SE2Q9NRR3 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
CDC42SE2Q9NRR3 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC15.28■□□□□ 0.04
CDC42SE2Q9NRR3 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDC42SE2Q9NRR3 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC15.28■□□□□ 0.04
CDC42SE2Q9NRR3 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDC42SE2Q9NRR3 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC15.28■□□□□ 0.04
CDC42SE2Q9NRR3 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDC42SE2Q9NRR3 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CDC42SE2Q9NRR3 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
CDC42SE2Q9NRR3 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC15.28■□□□□ 0.04
CDC42SE2Q9NRR3 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDC42SE2Q9NRR3 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC15.27■□□□□ 0.04
CDC42SE2Q9NRR3 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDC42SE2Q9NRR3 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CDC42SE2Q9NRR3 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CDC42SE2Q9NRR3 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDC42SE2Q9NRR3 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDC42SE2Q9NRR3 REST-206ENST00000612429 1376 ntTSL 5 BASIC15.27■□□□□ 0.04
CDC42SE2Q9NRR3 REST-207ENST00000616975 1370 ntTSL 5 BASIC15.27■□□□□ 0.04
CDC42SE2Q9NRR3 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CDC42SE2Q9NRR3 C11orf96-202ENST00000528572 1834 ntBASIC15.27■□□□□ 0.04
CDC42SE2Q9NRR3 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDC42SE2Q9NRR3 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDC42SE2Q9NRR3 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CDC42SE2Q9NRR3 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDC42SE2Q9NRR3 AC004987.1-201ENST00000428627 508 ntBASIC15.27■□□□□ 0.04
CDC42SE2Q9NRR3 ATP5G2P3-201ENST00000429083 425 ntBASIC15.27■□□□□ 0.04
CDC42SE2Q9NRR3 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC15.27■□□□□ 0.04
CDC42SE2Q9NRR3 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDC42SE2Q9NRR3 BRD4-212ENST00000630599 726 ntTSL 2 BASIC15.27■□□□□ 0.04
CDC42SE2Q9NRR3 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
CDC42SE2Q9NRR3 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDC42SE2Q9NRR3 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC15.27■□□□□ 0.03
CDC42SE2Q9NRR3 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC15.27■□□□□ 0.03
CDC42SE2Q9NRR3 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDC42SE2Q9NRR3 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDC42SE2Q9NRR3 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC15.27■□□□□ 0.03
CDC42SE2Q9NRR3 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
CDC42SE2Q9NRR3 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDC42SE2Q9NRR3 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDC42SE2Q9NRR3 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDC42SE2Q9NRR3 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDC42SE2Q9NRR3 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDC42SE2Q9NRR3 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDC42SE2Q9NRR3 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDC42SE2Q9NRR3 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC15.26■□□□□ 0.03
CDC42SE2Q9NRR3 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC15.26■□□□□ 0.03
CDC42SE2Q9NRR3 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDC42SE2Q9NRR3 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDC42SE2Q9NRR3 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDC42SE2Q9NRR3 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDC42SE2Q9NRR3 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms