Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHB16Q9NRJ7 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHB16Q9NRJ7 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
PCDHB16Q9NRJ7 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHB16Q9NRJ7 MIR4281-201ENST00000580852 62 ntBASIC19.18■□□□□ 0.66
PCDHB16Q9NRJ7 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC19.18■□□□□ 0.66
PCDHB16Q9NRJ7 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC19.18■□□□□ 0.66
PCDHB16Q9NRJ7 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHB16Q9NRJ7 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.18■□□□□ 0.66
PCDHB16Q9NRJ7 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHB16Q9NRJ7 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.18■□□□□ 0.66
PCDHB16Q9NRJ7 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC19.18■□□□□ 0.66
PCDHB16Q9NRJ7 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.17■□□□□ 0.66
PCDHB16Q9NRJ7 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHB16Q9NRJ7 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHB16Q9NRJ7 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHB16Q9NRJ7 GUK1-208ENST00000366728 842 ntTSL 2 BASIC19.17■□□□□ 0.66
PCDHB16Q9NRJ7 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC19.17■□□□□ 0.66
PCDHB16Q9NRJ7 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
PCDHB16Q9NRJ7 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHB16Q9NRJ7 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHB16Q9NRJ7 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHB16Q9NRJ7 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHB16Q9NRJ7 AC233723.2-201ENST00000623798 2106 ntBASIC19.16■□□□□ 0.66
PCDHB16Q9NRJ7 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHB16Q9NRJ7 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHB16Q9NRJ7 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHB16Q9NRJ7 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC19.16■□□□□ 0.66
PCDHB16Q9NRJ7 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHB16Q9NRJ7 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHB16Q9NRJ7 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHB16Q9NRJ7 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHB16Q9NRJ7 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHB16Q9NRJ7 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHB16Q9NRJ7 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.15■□□□□ 0.66
PCDHB16Q9NRJ7 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHB16Q9NRJ7 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
PCDHB16Q9NRJ7 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHB16Q9NRJ7 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHB16Q9NRJ7 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.15■□□□□ 0.66
PCDHB16Q9NRJ7 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
PCDHB16Q9NRJ7 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHB16Q9NRJ7 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC19.15■□□□□ 0.66
PCDHB16Q9NRJ7 AL033527.3-201ENST00000566366 1196 ntBASIC19.15■□□□□ 0.66
PCDHB16Q9NRJ7 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC19.15■□□□□ 0.66
PCDHB16Q9NRJ7 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHB16Q9NRJ7 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHB16Q9NRJ7 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.15■□□□□ 0.66
PCDHB16Q9NRJ7 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHB16Q9NRJ7 AF131216.4-201ENST00000638924 1588 ntBASIC19.15■□□□□ 0.66
PCDHB16Q9NRJ7 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.66
PCDHB16Q9NRJ7 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
PCDHB16Q9NRJ7 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHB16Q9NRJ7 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.14■□□□□ 0.65
PCDHB16Q9NRJ7 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.14■□□□□ 0.65
PCDHB16Q9NRJ7 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHB16Q9NRJ7 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC19.14■□□□□ 0.65
PCDHB16Q9NRJ7 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHB16Q9NRJ7 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.14■□□□□ 0.65
PCDHB16Q9NRJ7 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHB16Q9NRJ7 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.14■□□□□ 0.65
PCDHB16Q9NRJ7 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.14■□□□□ 0.65
PCDHB16Q9NRJ7 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHB16Q9NRJ7 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHB16Q9NRJ7 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHB16Q9NRJ7 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
PCDHB16Q9NRJ7 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
PCDHB16Q9NRJ7 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHB16Q9NRJ7 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.13■□□□□ 0.65
PCDHB16Q9NRJ7 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHB16Q9NRJ7 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC19.13■□□□□ 0.65
PCDHB16Q9NRJ7 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC19.13■□□□□ 0.65
PCDHB16Q9NRJ7 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
PCDHB16Q9NRJ7 ESRRAP2-201ENST00000418437 1549 ntBASIC19.13■□□□□ 0.65
PCDHB16Q9NRJ7 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHB16Q9NRJ7 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
PCDHB16Q9NRJ7 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHB16Q9NRJ7 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
PCDHB16Q9NRJ7 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.13■□□□□ 0.65
PCDHB16Q9NRJ7 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.12■□□□□ 0.65
PCDHB16Q9NRJ7 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHB16Q9NRJ7 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.12■□□□□ 0.65
PCDHB16Q9NRJ7 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.12■□□□□ 0.65
PCDHB16Q9NRJ7 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHB16Q9NRJ7 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC19.12■□□□□ 0.65
PCDHB16Q9NRJ7 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHB16Q9NRJ7 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC19.12■□□□□ 0.65
PCDHB16Q9NRJ7 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.12■□□□□ 0.65
PCDHB16Q9NRJ7 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.11■□□□□ 0.65
PCDHB16Q9NRJ7 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHB16Q9NRJ7 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHB16Q9NRJ7 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHB16Q9NRJ7 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHB16Q9NRJ7 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHB16Q9NRJ7 MIR4508-201ENST00000584178 70 ntBASIC19.11■□□□□ 0.65
PCDHB16Q9NRJ7 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHB16Q9NRJ7 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
PCDHB16Q9NRJ7 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHB16Q9NRJ7 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
PCDHB16Q9NRJ7 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms