Protein–RNA interactions for Protein: Q9NRF8

CTPS2, CTP synthase 2, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2Q9NRF8 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.61■□□□□ 0.89
CTPS2Q9NRF8 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTPS2Q9NRF8 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CTPS2Q9NRF8 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTPS2Q9NRF8 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTPS2Q9NRF8 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CTPS2Q9NRF8 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CTPS2Q9NRF8 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CTPS2Q9NRF8 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.6■□□□□ 0.89
CTPS2Q9NRF8 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.6■□□□□ 0.89
CTPS2Q9NRF8 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CTPS2Q9NRF8 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.6■□□□□ 0.89
CTPS2Q9NRF8 MIR6722-201ENST00000617286 78 ntBASIC20.6■□□□□ 0.89
CTPS2Q9NRF8 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CTPS2Q9NRF8 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CTPS2Q9NRF8 AL353803.4-201ENST00000565882 1934 ntBASIC20.59■□□□□ 0.89
CTPS2Q9NRF8 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CTPS2Q9NRF8 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CTPS2Q9NRF8 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CTPS2Q9NRF8 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CTPS2Q9NRF8 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CTPS2Q9NRF8 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CTPS2Q9NRF8 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CTPS2Q9NRF8 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.59■□□□□ 0.89
CTPS2Q9NRF8 MTDHP2-201ENST00000601468 714 ntBASIC20.59■□□□□ 0.89
CTPS2Q9NRF8 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CTPS2Q9NRF8 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CTPS2Q9NRF8 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.59■□□□□ 0.89
CTPS2Q9NRF8 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
CTPS2Q9NRF8 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.58■□□□□ 0.89
CTPS2Q9NRF8 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CTPS2Q9NRF8 GUSBP5-202ENST00000510805 1989 ntBASIC20.58■□□□□ 0.89
CTPS2Q9NRF8 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.58■□□□□ 0.89
CTPS2Q9NRF8 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CTPS2Q9NRF8 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CTPS2Q9NRF8 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CTPS2Q9NRF8 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CTPS2Q9NRF8 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.58■□□□□ 0.89
CTPS2Q9NRF8 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CTPS2Q9NRF8 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
CTPS2Q9NRF8 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CTPS2Q9NRF8 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CTPS2Q9NRF8 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CTPS2Q9NRF8 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CTPS2Q9NRF8 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CTPS2Q9NRF8 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CTPS2Q9NRF8 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.57■□□□□ 0.88
CTPS2Q9NRF8 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CTPS2Q9NRF8 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.57■□□□□ 0.88
CTPS2Q9NRF8 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CTPS2Q9NRF8 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CTPS2Q9NRF8 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CTPS2Q9NRF8 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.57■□□□□ 0.88
CTPS2Q9NRF8 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.57■□□□□ 0.88
CTPS2Q9NRF8 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CTPS2Q9NRF8 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CTPS2Q9NRF8 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CTPS2Q9NRF8 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.56■□□□□ 0.88
CTPS2Q9NRF8 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.56■□□□□ 0.88
CTPS2Q9NRF8 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.56■□□□□ 0.88
CTPS2Q9NRF8 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CTPS2Q9NRF8 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.56■□□□□ 0.88
CTPS2Q9NRF8 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
CTPS2Q9NRF8 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CTPS2Q9NRF8 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
CTPS2Q9NRF8 PKD1P6-201ENST00000343738 4769 ntBASIC20.55■□□□□ 0.88
CTPS2Q9NRF8 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CTPS2Q9NRF8 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.55■□□□□ 0.88
CTPS2Q9NRF8 UNC93B8-201ENST00000511903 705 ntBASIC20.55■□□□□ 0.88
CTPS2Q9NRF8 AC010997.5-201ENST00000609182 354 ntBASIC20.55■□□□□ 0.88
CTPS2Q9NRF8 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CTPS2Q9NRF8 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CTPS2Q9NRF8 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
CTPS2Q9NRF8 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.54■□□□□ 0.88
CTPS2Q9NRF8 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CTPS2Q9NRF8 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CTPS2Q9NRF8 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CTPS2Q9NRF8 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CTPS2Q9NRF8 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
CTPS2Q9NRF8 AC005703.6-201ENST00000623265 1329 ntBASIC20.53■□□□□ 0.88
CTPS2Q9NRF8 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CTPS2Q9NRF8 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CTPS2Q9NRF8 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.53■□□□□ 0.88
CTPS2Q9NRF8 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.53■□□□□ 0.88
CTPS2Q9NRF8 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CTPS2Q9NRF8 GUSBP5-201ENST00000418136 578 ntBASIC20.53■□□□□ 0.88
CTPS2Q9NRF8 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.53■□□□□ 0.88
CTPS2Q9NRF8 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.53■□□□□ 0.88
CTPS2Q9NRF8 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CTPS2Q9NRF8 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CTPS2Q9NRF8 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CTPS2Q9NRF8 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.53■□□□□ 0.88
CTPS2Q9NRF8 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CTPS2Q9NRF8 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.53■□□□□ 0.88
CTPS2Q9NRF8 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.52■□□□□ 0.88
CTPS2Q9NRF8 LINC00565-201ENST00000562710 2331 ntBASIC20.52■□□□□ 0.88
CTPS2Q9NRF8 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CTPS2Q9NRF8 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.52■□□□□ 0.88
CTPS2Q9NRF8 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
CTPS2Q9NRF8 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms