Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HINT3Q9NQE9 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.07■□□□□ 0.8
HINT3Q9NQE9 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
HINT3Q9NQE9 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.07■□□□□ 0.8
HINT3Q9NQE9 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.06■□□□□ 0.8
HINT3Q9NQE9 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
HINT3Q9NQE9 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
HINT3Q9NQE9 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
HINT3Q9NQE9 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HINT3Q9NQE9 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.06■□□□□ 0.8
HINT3Q9NQE9 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
HINT3Q9NQE9 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.06■□□□□ 0.8
HINT3Q9NQE9 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.06■□□□□ 0.8
HINT3Q9NQE9 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.06■□□□□ 0.8
HINT3Q9NQE9 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HINT3Q9NQE9 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
HINT3Q9NQE9 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.05■□□□□ 0.8
HINT3Q9NQE9 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.05■□□□□ 0.8
HINT3Q9NQE9 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.05■□□□□ 0.8
HINT3Q9NQE9 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.05■□□□□ 0.8
HINT3Q9NQE9 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
HINT3Q9NQE9 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HINT3Q9NQE9 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HINT3Q9NQE9 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HINT3Q9NQE9 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HINT3Q9NQE9 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.05■□□□□ 0.8
HINT3Q9NQE9 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HINT3Q9NQE9 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HINT3Q9NQE9 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HINT3Q9NQE9 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HINT3Q9NQE9 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HINT3Q9NQE9 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.04■□□□□ 0.8
HINT3Q9NQE9 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HINT3Q9NQE9 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HINT3Q9NQE9 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
HINT3Q9NQE9 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
HINT3Q9NQE9 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HINT3Q9NQE9 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.04■□□□□ 0.8
HINT3Q9NQE9 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.04■□□□□ 0.8
HINT3Q9NQE9 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
HINT3Q9NQE9 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HINT3Q9NQE9 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
HINT3Q9NQE9 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.04■□□□□ 0.8
HINT3Q9NQE9 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.04■□□□□ 0.8
HINT3Q9NQE9 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HINT3Q9NQE9 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
HINT3Q9NQE9 AC139530.1-201ENST00000575312 1977 ntBASIC20.03■□□□□ 0.8
HINT3Q9NQE9 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
HINT3Q9NQE9 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
HINT3Q9NQE9 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HINT3Q9NQE9 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HINT3Q9NQE9 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HINT3Q9NQE9 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
HINT3Q9NQE9 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.02■□□□□ 0.8
HINT3Q9NQE9 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HINT3Q9NQE9 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HINT3Q9NQE9 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
HINT3Q9NQE9 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HINT3Q9NQE9 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.02■□□□□ 0.8
HINT3Q9NQE9 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.02■□□□□ 0.8
HINT3Q9NQE9 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HINT3Q9NQE9 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HINT3Q9NQE9 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.02■□□□□ 0.8
HINT3Q9NQE9 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.79
HINT3Q9NQE9 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
HINT3Q9NQE9 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
HINT3Q9NQE9 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
HINT3Q9NQE9 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
HINT3Q9NQE9 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
HINT3Q9NQE9 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
HINT3Q9NQE9 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
HINT3Q9NQE9 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
HINT3Q9NQE9 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
HINT3Q9NQE9 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
HINT3Q9NQE9 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.01■□□□□ 0.79
HINT3Q9NQE9 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
HINT3Q9NQE9 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HINT3Q9NQE9 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HINT3Q9NQE9 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.01■□□□□ 0.79
HINT3Q9NQE9 AC007375.3-201ENST00000600936 2314 ntBASIC20.01■□□□□ 0.79
HINT3Q9NQE9 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HINT3Q9NQE9 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20■□□□□ 0.79
HINT3Q9NQE9 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
HINT3Q9NQE9 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20■□□□□ 0.79
HINT3Q9NQE9 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HINT3Q9NQE9 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HINT3Q9NQE9 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20■□□□□ 0.79
HINT3Q9NQE9 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
HINT3Q9NQE9 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HINT3Q9NQE9 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20■□□□□ 0.79
HINT3Q9NQE9 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
HINT3Q9NQE9 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
HINT3Q9NQE9 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20■□□□□ 0.79
HINT3Q9NQE9 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
HINT3Q9NQE9 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.99■□□□□ 0.79
HINT3Q9NQE9 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HINT3Q9NQE9 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HINT3Q9NQE9 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
HINT3Q9NQE9 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.99■□□□□ 0.79
HINT3Q9NQE9 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms