Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
NEUROD4Q9HD90 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
NEUROD4Q9HD90 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NEUROD4Q9HD90 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NEUROD4Q9HD90 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.94■□□□□ 0.94
NEUROD4Q9HD90 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
NEUROD4Q9HD90 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NEUROD4Q9HD90 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NEUROD4Q9HD90 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NEUROD4Q9HD90 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
NEUROD4Q9HD90 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NEUROD4Q9HD90 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
NEUROD4Q9HD90 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.93■□□□□ 0.94
NEUROD4Q9HD90 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.93■□□□□ 0.94
NEUROD4Q9HD90 AC239859.2-201ENST00000444165 318 ntBASIC20.93■□□□□ 0.94
NEUROD4Q9HD90 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.93■□□□□ 0.94
NEUROD4Q9HD90 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
NEUROD4Q9HD90 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.93■□□□□ 0.94
NEUROD4Q9HD90 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
NEUROD4Q9HD90 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NEUROD4Q9HD90 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.93■□□□□ 0.94
NEUROD4Q9HD90 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
NEUROD4Q9HD90 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
NEUROD4Q9HD90 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NEUROD4Q9HD90 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NEUROD4Q9HD90 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
NEUROD4Q9HD90 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
NEUROD4Q9HD90 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NEUROD4Q9HD90 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NEUROD4Q9HD90 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.92■□□□□ 0.94
NEUROD4Q9HD90 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NEUROD4Q9HD90 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NEUROD4Q9HD90 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.92■□□□□ 0.94
NEUROD4Q9HD90 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
NEUROD4Q9HD90 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
NEUROD4Q9HD90 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
NEUROD4Q9HD90 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.92■□□□□ 0.94
NEUROD4Q9HD90 GUSBP5-202ENST00000510805 1989 ntBASIC20.92■□□□□ 0.94
NEUROD4Q9HD90 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NEUROD4Q9HD90 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.92■□□□□ 0.94
NEUROD4Q9HD90 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
NEUROD4Q9HD90 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NEUROD4Q9HD90 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NEUROD4Q9HD90 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
NEUROD4Q9HD90 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
NEUROD4Q9HD90 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NEUROD4Q9HD90 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NEUROD4Q9HD90 AC010997.5-201ENST00000609182 354 ntBASIC20.91■□□□□ 0.94
NEUROD4Q9HD90 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.91■□□□□ 0.94
NEUROD4Q9HD90 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NEUROD4Q9HD90 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NEUROD4Q9HD90 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
NEUROD4Q9HD90 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NEUROD4Q9HD90 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NEUROD4Q9HD90 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NEUROD4Q9HD90 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NEUROD4Q9HD90 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NEUROD4Q9HD90 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.9■□□□□ 0.94
NEUROD4Q9HD90 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NEUROD4Q9HD90 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
NEUROD4Q9HD90 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NEUROD4Q9HD90 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.89■□□□□ 0.94
NEUROD4Q9HD90 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
NEUROD4Q9HD90 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
NEUROD4Q9HD90 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
NEUROD4Q9HD90 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NEUROD4Q9HD90 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NEUROD4Q9HD90 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NEUROD4Q9HD90 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.89■□□□□ 0.93
NEUROD4Q9HD90 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
NEUROD4Q9HD90 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NEUROD4Q9HD90 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NEUROD4Q9HD90 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
NEUROD4Q9HD90 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.89■□□□□ 0.93
NEUROD4Q9HD90 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NEUROD4Q9HD90 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NEUROD4Q9HD90 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
NEUROD4Q9HD90 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NEUROD4Q9HD90 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NEUROD4Q9HD90 TSPY9P-201ENST00000440215 945 ntBASIC20.88■□□□□ 0.93
NEUROD4Q9HD90 TSPY11P-201ENST00000442607 1045 ntBASIC20.88■□□□□ 0.93
NEUROD4Q9HD90 DUX4L4-201ENST00000566884 1269 ntBASIC20.88■□□□□ 0.93
NEUROD4Q9HD90 AC009086.3-201ENST00000623486 1008 ntBASIC20.88■□□□□ 0.93
NEUROD4Q9HD90 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
NEUROD4Q9HD90 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.88■□□□□ 0.93
NEUROD4Q9HD90 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NEUROD4Q9HD90 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
NEUROD4Q9HD90 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NEUROD4Q9HD90 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
NEUROD4Q9HD90 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
NEUROD4Q9HD90 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
NEUROD4Q9HD90 AC009102.2-201ENST00000606772 1639 ntBASIC20.87■□□□□ 0.93
NEUROD4Q9HD90 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.87■□□□□ 0.93
NEUROD4Q9HD90 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
NEUROD4Q9HD90 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NEUROD4Q9HD90 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
NEUROD4Q9HD90 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NEUROD4Q9HD90 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NEUROD4Q9HD90 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NEUROD4Q9HD90 AC127496.7-201ENST00000625110 1798 ntBASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms