Protein–RNA interactions for Protein: Q9HCX3

ZNF304, Zinc finger protein 304, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF304Q9HCX3 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ZNF304Q9HCX3 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ZNF304Q9HCX3 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
ZNF304Q9HCX3 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.06■□□□□ 0.96
ZNF304Q9HCX3 BX842568.3-201ENST00000418104 571 ntBASIC21.06■□□□□ 0.96
ZNF304Q9HCX3 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ZNF304Q9HCX3 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
ZNF304Q9HCX3 AC233992.3-201ENST00000607491 485 ntBASIC21.06■□□□□ 0.96
ZNF304Q9HCX3 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.06■□□□□ 0.96
ZNF304Q9HCX3 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.06■□□□□ 0.96
ZNF304Q9HCX3 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
ZNF304Q9HCX3 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.06■□□□□ 0.96
ZNF304Q9HCX3 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.06■□□□□ 0.96
ZNF304Q9HCX3 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
ZNF304Q9HCX3 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ZNF304Q9HCX3 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ZNF304Q9HCX3 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ZNF304Q9HCX3 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ZNF304Q9HCX3 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.05■□□□□ 0.96
ZNF304Q9HCX3 AC099791.1-201ENST00000416440 715 ntBASIC21.05■□□□□ 0.96
ZNF304Q9HCX3 CA15P2-201ENST00000611168 834 ntBASIC21.05■□□□□ 0.96
ZNF304Q9HCX3 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ZNF304Q9HCX3 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
ZNF304Q9HCX3 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
ZNF304Q9HCX3 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.05■□□□□ 0.96
ZNF304Q9HCX3 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
ZNF304Q9HCX3 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZNF304Q9HCX3 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZNF304Q9HCX3 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZNF304Q9HCX3 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZNF304Q9HCX3 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21.04■□□□□ 0.96
ZNF304Q9HCX3 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.04■□□□□ 0.96
ZNF304Q9HCX3 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.04■□□□□ 0.96
ZNF304Q9HCX3 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ZNF304Q9HCX3 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.04■□□□□ 0.96
ZNF304Q9HCX3 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
ZNF304Q9HCX3 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ZNF304Q9HCX3 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZNF304Q9HCX3 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.04■□□□□ 0.96
ZNF304Q9HCX3 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.03■□□□□ 0.96
ZNF304Q9HCX3 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ZNF304Q9HCX3 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.03■□□□□ 0.96
ZNF304Q9HCX3 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ZNF304Q9HCX3 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ZNF304Q9HCX3 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
ZNF304Q9HCX3 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.03■□□□□ 0.96
ZNF304Q9HCX3 AC105265.2-201ENST00000467189 838 ntBASIC21.03■□□□□ 0.96
ZNF304Q9HCX3 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
ZNF304Q9HCX3 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC21.03■□□□□ 0.96
ZNF304Q9HCX3 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21.03■□□□□ 0.96
ZNF304Q9HCX3 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ZNF304Q9HCX3 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ZNF304Q9HCX3 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
ZNF304Q9HCX3 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ZNF304Q9HCX3 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ZNF304Q9HCX3 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ZNF304Q9HCX3 GUK1-205ENST00000366722 850 ntTSL 3 BASIC21.02■□□□□ 0.96
ZNF304Q9HCX3 MIR935-201ENST00000401179 91 ntBASIC21.02■□□□□ 0.96
ZNF304Q9HCX3 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.02■□□□□ 0.96
ZNF304Q9HCX3 ZNRF2P3-201ENST00000424200 374 ntBASIC21.02■□□□□ 0.96
ZNF304Q9HCX3 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ZNF304Q9HCX3 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ZNF304Q9HCX3 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ZNF304Q9HCX3 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
ZNF304Q9HCX3 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.02■□□□□ 0.96
ZNF304Q9HCX3 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ZNF304Q9HCX3 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.02■□□□□ 0.95
ZNF304Q9HCX3 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
ZNF304Q9HCX3 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
ZNF304Q9HCX3 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ZNF304Q9HCX3 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.01■□□□□ 0.95
ZNF304Q9HCX3 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.01■□□□□ 0.95
ZNF304Q9HCX3 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ZNF304Q9HCX3 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
ZNF304Q9HCX3 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ZNF304Q9HCX3 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
ZNF304Q9HCX3 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
ZNF304Q9HCX3 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ZNF304Q9HCX3 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
ZNF304Q9HCX3 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21■□□□□ 0.95
ZNF304Q9HCX3 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ZNF304Q9HCX3 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ZNF304Q9HCX3 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
ZNF304Q9HCX3 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
ZNF304Q9HCX3 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC21■□□□□ 0.95
ZNF304Q9HCX3 SLC47A1P1-202ENST00000449666 945 ntBASIC21■□□□□ 0.95
ZNF304Q9HCX3 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC21■□□□□ 0.95
ZNF304Q9HCX3 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC21■□□□□ 0.95
ZNF304Q9HCX3 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC21■□□□□ 0.95
ZNF304Q9HCX3 MPST-208ENST00000628507 698 ntTSL 5 BASIC21■□□□□ 0.95
ZNF304Q9HCX3 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ZNF304Q9HCX3 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ZNF304Q9HCX3 AL353803.4-201ENST00000565882 1934 ntBASIC21■□□□□ 0.95
ZNF304Q9HCX3 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ZNF304Q9HCX3 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ZNF304Q9HCX3 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
ZNF304Q9HCX3 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
ZNF304Q9HCX3 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.99■□□□□ 0.95
ZNF304Q9HCX3 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.99■□□□□ 0.95
ZNF304Q9HCX3 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms