Protein–RNA interactions for Protein: Q9HCL0

PCDH18, Protocadherin-18, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH18Q9HCL0 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
PCDH18Q9HCL0 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PCDH18Q9HCL0 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PCDH18Q9HCL0 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
PCDH18Q9HCL0 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
PCDH18Q9HCL0 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC23.02■■□□□ 1.28
PCDH18Q9HCL0 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
PCDH18Q9HCL0 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC23.02■■□□□ 1.28
PCDH18Q9HCL0 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
PCDH18Q9HCL0 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
PCDH18Q9HCL0 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PCDH18Q9HCL0 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
PCDH18Q9HCL0 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PCDH18Q9HCL0 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
PCDH18Q9HCL0 RASSF1-AS1-201ENST00000629828 790 ntBASIC23.02■■□□□ 1.28
PCDH18Q9HCL0 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
PCDH18Q9HCL0 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
PCDH18Q9HCL0 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PCDH18Q9HCL0 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC23.02■■□□□ 1.28
PCDH18Q9HCL0 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
PCDH18Q9HCL0 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC23.01■■□□□ 1.27
PCDH18Q9HCL0 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PCDH18Q9HCL0 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
PCDH18Q9HCL0 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
PCDH18Q9HCL0 AC233723.2-201ENST00000623798 2106 ntBASIC23■■□□□ 1.27
PCDH18Q9HCL0 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC23■■□□□ 1.27
PCDH18Q9HCL0 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
PCDH18Q9HCL0 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC23■■□□□ 1.27
PCDH18Q9HCL0 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
PCDH18Q9HCL0 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
PCDH18Q9HCL0 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC23■■□□□ 1.27
PCDH18Q9HCL0 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC23■■□□□ 1.27
PCDH18Q9HCL0 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC23■■□□□ 1.27
PCDH18Q9HCL0 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC23■■□□□ 1.27
PCDH18Q9HCL0 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC23■■□□□ 1.27
PCDH18Q9HCL0 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PCDH18Q9HCL0 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PCDH18Q9HCL0 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC22.99■■□□□ 1.27
PCDH18Q9HCL0 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
PCDH18Q9HCL0 QDPR-206ENST00000508623 601 ntTSL 3 BASIC22.99■■□□□ 1.27
PCDH18Q9HCL0 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC22.99■■□□□ 1.27
PCDH18Q9HCL0 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
PCDH18Q9HCL0 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
PCDH18Q9HCL0 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
PCDH18Q9HCL0 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
PCDH18Q9HCL0 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PCDH18Q9HCL0 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PCDH18Q9HCL0 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
PCDH18Q9HCL0 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PCDH18Q9HCL0 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
PCDH18Q9HCL0 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
PCDH18Q9HCL0 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PCDH18Q9HCL0 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
PCDH18Q9HCL0 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
PCDH18Q9HCL0 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC22.98■■□□□ 1.27
PCDH18Q9HCL0 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
PCDH18Q9HCL0 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
PCDH18Q9HCL0 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
PCDH18Q9HCL0 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC22.98■■□□□ 1.27
PCDH18Q9HCL0 AC009086.3-201ENST00000623486 1008 ntBASIC22.98■■□□□ 1.27
PCDH18Q9HCL0 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PCDH18Q9HCL0 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC22.98■■□□□ 1.27
PCDH18Q9HCL0 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC22.98■■□□□ 1.27
PCDH18Q9HCL0 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
PCDH18Q9HCL0 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
PCDH18Q9HCL0 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PCDH18Q9HCL0 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
PCDH18Q9HCL0 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PCDH18Q9HCL0 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
PCDH18Q9HCL0 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC22.97■■□□□ 1.27
PCDH18Q9HCL0 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
PCDH18Q9HCL0 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PCDH18Q9HCL0 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PCDH18Q9HCL0 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PCDH18Q9HCL0 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PCDH18Q9HCL0 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PCDH18Q9HCL0 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PCDH18Q9HCL0 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC22.97■■□□□ 1.27
PCDH18Q9HCL0 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PCDH18Q9HCL0 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
PCDH18Q9HCL0 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PCDH18Q9HCL0 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
PCDH18Q9HCL0 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PCDH18Q9HCL0 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PCDH18Q9HCL0 TERT-206ENST00000508104 2486 ntTSL 5 BASIC22.96■■□□□ 1.27
PCDH18Q9HCL0 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC22.96■■□□□ 1.27
PCDH18Q9HCL0 AL512631.2-201ENST00000604634 923 ntBASIC22.96■■□□□ 1.27
PCDH18Q9HCL0 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PCDH18Q9HCL0 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC22.96■■□□□ 1.27
PCDH18Q9HCL0 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PCDH18Q9HCL0 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC22.96■■□□□ 1.27
PCDH18Q9HCL0 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
PCDH18Q9HCL0 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC22.96■■□□□ 1.27
PCDH18Q9HCL0 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
PCDH18Q9HCL0 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PCDH18Q9HCL0 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
PCDH18Q9HCL0 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
PCDH18Q9HCL0 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
PCDH18Q9HCL0 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
PCDH18Q9HCL0 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC22.95■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms