Protein–RNA interactions for Protein: Q9HB65

ELL3, RNA polymerase II elongation factor ELL3, humanhuman

Predicted RBP Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ELL3Q9HB65 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.27■□□□□ 0.68
ELL3Q9HB65 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ELL3Q9HB65 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ELL3Q9HB65 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
ELL3Q9HB65 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.27■□□□□ 0.68
ELL3Q9HB65 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
ELL3Q9HB65 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ELL3Q9HB65 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.27■□□□□ 0.68
ELL3Q9HB65 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ELL3Q9HB65 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC19.27■□□□□ 0.68
ELL3Q9HB65 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.27■□□□□ 0.68
ELL3Q9HB65 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ELL3Q9HB65 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC19.27■□□□□ 0.67
ELL3Q9HB65 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ELL3Q9HB65 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ELL3Q9HB65 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ELL3Q9HB65 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ELL3Q9HB65 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ELL3Q9HB65 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ELL3Q9HB65 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ELL3Q9HB65 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
ELL3Q9HB65 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ELL3Q9HB65 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ELL3Q9HB65 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ELL3Q9HB65 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
ELL3Q9HB65 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC19.25■□□□□ 0.67
ELL3Q9HB65 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ELL3Q9HB65 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
ELL3Q9HB65 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ELL3Q9HB65 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
ELL3Q9HB65 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.25■□□□□ 0.67
ELL3Q9HB65 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ELL3Q9HB65 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ELL3Q9HB65 AC009299.2-201ENST00000482477 511 ntBASIC19.25■□□□□ 0.67
ELL3Q9HB65 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ELL3Q9HB65 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ELL3Q9HB65 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ELL3Q9HB65 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
ELL3Q9HB65 AF131216.4-201ENST00000638924 1588 ntBASIC19.24■□□□□ 0.67
ELL3Q9HB65 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.24■□□□□ 0.67
ELL3Q9HB65 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.24■□□□□ 0.67
ELL3Q9HB65 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ELL3Q9HB65 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ELL3Q9HB65 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC19.24■□□□□ 0.67
ELL3Q9HB65 RNF146-205ENST00000477776 762 ntTSL 3 BASIC19.24■□□□□ 0.67
ELL3Q9HB65 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
ELL3Q9HB65 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.24■□□□□ 0.67
ELL3Q9HB65 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC19.24■□□□□ 0.67
ELL3Q9HB65 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
ELL3Q9HB65 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ELL3Q9HB65 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.24■□□□□ 0.67
ELL3Q9HB65 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ELL3Q9HB65 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
ELL3Q9HB65 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
ELL3Q9HB65 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ELL3Q9HB65 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ELL3Q9HB65 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.23■□□□□ 0.67
ELL3Q9HB65 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
ELL3Q9HB65 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ELL3Q9HB65 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ELL3Q9HB65 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
ELL3Q9HB65 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ELL3Q9HB65 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.23■□□□□ 0.67
ELL3Q9HB65 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
ELL3Q9HB65 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ELL3Q9HB65 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ELL3Q9HB65 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ELL3Q9HB65 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ELL3Q9HB65 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ELL3Q9HB65 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
ELL3Q9HB65 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ELL3Q9HB65 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ELL3Q9HB65 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
ELL3Q9HB65 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
ELL3Q9HB65 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ELL3Q9HB65 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ELL3Q9HB65 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ELL3Q9HB65 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.22■□□□□ 0.67
ELL3Q9HB65 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.22■□□□□ 0.67
ELL3Q9HB65 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ELL3Q9HB65 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ELL3Q9HB65 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ELL3Q9HB65 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
ELL3Q9HB65 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
ELL3Q9HB65 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ELL3Q9HB65 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.21■□□□□ 0.67
ELL3Q9HB65 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
ELL3Q9HB65 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ELL3Q9HB65 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ELL3Q9HB65 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
ELL3Q9HB65 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
ELL3Q9HB65 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
ELL3Q9HB65 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.21■□□□□ 0.67
ELL3Q9HB65 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.21■□□□□ 0.67
ELL3Q9HB65 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.21■□□□□ 0.67
ELL3Q9HB65 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ELL3Q9HB65 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.21■□□□□ 0.67
ELL3Q9HB65 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ELL3Q9HB65 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
ELL3Q9HB65 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms