Protein–RNA interactions for Protein: Q9H5U6

ZCCHC4, Zinc finger CCHC domain-containing protein 4, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC4Q9H5U6 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
ZCCHC4Q9H5U6 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.5■□□□□ 0.71
ZCCHC4Q9H5U6 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
ZCCHC4Q9H5U6 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ZCCHC4Q9H5U6 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.5■□□□□ 0.71
ZCCHC4Q9H5U6 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.5■□□□□ 0.71
ZCCHC4Q9H5U6 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ZCCHC4Q9H5U6 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
ZCCHC4Q9H5U6 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
ZCCHC4Q9H5U6 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ZCCHC4Q9H5U6 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
ZCCHC4Q9H5U6 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
ZCCHC4Q9H5U6 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
ZCCHC4Q9H5U6 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ZCCHC4Q9H5U6 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.49■□□□□ 0.71
ZCCHC4Q9H5U6 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
ZCCHC4Q9H5U6 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.49■□□□□ 0.71
ZCCHC4Q9H5U6 AC074183.2-201ENST00000623112 922 ntBASIC19.49■□□□□ 0.71
ZCCHC4Q9H5U6 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ZCCHC4Q9H5U6 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ZCCHC4Q9H5U6 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ZCCHC4Q9H5U6 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ZCCHC4Q9H5U6 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.48■□□□□ 0.71
ZCCHC4Q9H5U6 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZCCHC4Q9H5U6 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZCCHC4Q9H5U6 KRT18P24-201ENST00000344739 1156 ntBASIC19.48■□□□□ 0.71
ZCCHC4Q9H5U6 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
ZCCHC4Q9H5U6 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ZCCHC4Q9H5U6 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC19.48■□□□□ 0.71
ZCCHC4Q9H5U6 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
ZCCHC4Q9H5U6 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
ZCCHC4Q9H5U6 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.48■□□□□ 0.71
ZCCHC4Q9H5U6 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZCCHC4Q9H5U6 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZCCHC4Q9H5U6 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ZCCHC4Q9H5U6 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZCCHC4Q9H5U6 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ZCCHC4Q9H5U6 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZCCHC4Q9H5U6 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
ZCCHC4Q9H5U6 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.47■□□□□ 0.71
ZCCHC4Q9H5U6 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZCCHC4Q9H5U6 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ZCCHC4Q9H5U6 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ZCCHC4Q9H5U6 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZCCHC4Q9H5U6 THA1P-201ENST00000590384 1145 ntBASIC19.47■□□□□ 0.71
ZCCHC4Q9H5U6 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC19.47■□□□□ 0.71
ZCCHC4Q9H5U6 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZCCHC4Q9H5U6 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZCCHC4Q9H5U6 AF131216.4-201ENST00000638924 1588 ntBASIC19.47■□□□□ 0.71
ZCCHC4Q9H5U6 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
ZCCHC4Q9H5U6 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.47■□□□□ 0.71
ZCCHC4Q9H5U6 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.47■□□□□ 0.71
ZCCHC4Q9H5U6 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZCCHC4Q9H5U6 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZCCHC4Q9H5U6 AC079630.1-202ENST00000618127 1840 ntBASIC19.46■□□□□ 0.71
ZCCHC4Q9H5U6 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZCCHC4Q9H5U6 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.46■□□□□ 0.71
ZCCHC4Q9H5U6 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZCCHC4Q9H5U6 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZCCHC4Q9H5U6 AC004987.1-201ENST00000428627 508 ntBASIC19.46■□□□□ 0.71
ZCCHC4Q9H5U6 MIR4281-201ENST00000580852 62 ntBASIC19.46■□□□□ 0.71
ZCCHC4Q9H5U6 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZCCHC4Q9H5U6 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZCCHC4Q9H5U6 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZCCHC4Q9H5U6 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.46■□□□□ 0.71
ZCCHC4Q9H5U6 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZCCHC4Q9H5U6 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.46■□□□□ 0.71
ZCCHC4Q9H5U6 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.45■□□□□ 0.7
ZCCHC4Q9H5U6 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.45■□□□□ 0.7
ZCCHC4Q9H5U6 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZCCHC4Q9H5U6 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZCCHC4Q9H5U6 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.45■□□□□ 0.7
ZCCHC4Q9H5U6 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC19.45■□□□□ 0.7
ZCCHC4Q9H5U6 ATP5G2P3-201ENST00000429083 425 ntBASIC19.45■□□□□ 0.7
ZCCHC4Q9H5U6 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ZCCHC4Q9H5U6 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.45■□□□□ 0.7
ZCCHC4Q9H5U6 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.45■□□□□ 0.7
ZCCHC4Q9H5U6 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZCCHC4Q9H5U6 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZCCHC4Q9H5U6 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.45■□□□□ 0.7
ZCCHC4Q9H5U6 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZCCHC4Q9H5U6 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZCCHC4Q9H5U6 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZCCHC4Q9H5U6 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
ZCCHC4Q9H5U6 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZCCHC4Q9H5U6 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZCCHC4Q9H5U6 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZCCHC4Q9H5U6 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZCCHC4Q9H5U6 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.44■□□□□ 0.7
ZCCHC4Q9H5U6 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
ZCCHC4Q9H5U6 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ZCCHC4Q9H5U6 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.44■□□□□ 0.7
ZCCHC4Q9H5U6 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZCCHC4Q9H5U6 PVT1_1.1-201ENST00000615125 194 ntBASIC19.44■□□□□ 0.7
ZCCHC4Q9H5U6 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
ZCCHC4Q9H5U6 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ZCCHC4Q9H5U6 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.44■□□□□ 0.7
ZCCHC4Q9H5U6 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZCCHC4Q9H5U6 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZCCHC4Q9H5U6 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms