Protein–RNA interactions for Protein: Q9H4S2

GSX1, GS homeobox 1, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GSX1Q9H4S2 pRNA.11-201ENST00000618423 90 ntBASIC18.78■□□□□ 0.6
GSX1Q9H4S2 pRNA.13-201ENST00000619112 90 ntBASIC18.78■□□□□ 0.6
GSX1Q9H4S2 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
GSX1Q9H4S2 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
GSX1Q9H4S2 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GSX1Q9H4S2 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC18.78■□□□□ 0.6
GSX1Q9H4S2 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC18.78■□□□□ 0.6
GSX1Q9H4S2 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GSX1Q9H4S2 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC18.77■□□□□ 0.6
GSX1Q9H4S2 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GSX1Q9H4S2 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
GSX1Q9H4S2 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GSX1Q9H4S2 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
GSX1Q9H4S2 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GSX1Q9H4S2 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
GSX1Q9H4S2 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC18.77■□□□□ 0.6
GSX1Q9H4S2 IGHV3-19-201ENST00000521488 291 ntBASIC18.77■□□□□ 0.6
GSX1Q9H4S2 AC137761.2-201ENST00000561729 223 ntBASIC18.77■□□□□ 0.6
GSX1Q9H4S2 AC145350.3-201ENST00000569033 163 ntBASIC18.77■□□□□ 0.6
GSX1Q9H4S2 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
GSX1Q9H4S2 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
GSX1Q9H4S2 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
GSX1Q9H4S2 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC18.77■□□□□ 0.59
GSX1Q9H4S2 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GSX1Q9H4S2 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GSX1Q9H4S2 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GSX1Q9H4S2 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
GSX1Q9H4S2 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
GSX1Q9H4S2 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
GSX1Q9H4S2 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GSX1Q9H4S2 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
GSX1Q9H4S2 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.76■□□□□ 0.59
GSX1Q9H4S2 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
GSX1Q9H4S2 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GSX1Q9H4S2 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
GSX1Q9H4S2 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
GSX1Q9H4S2 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC18.76■□□□□ 0.59
GSX1Q9H4S2 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
GSX1Q9H4S2 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
GSX1Q9H4S2 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
GSX1Q9H4S2 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
GSX1Q9H4S2 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
GSX1Q9H4S2 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.75■□□□□ 0.59
GSX1Q9H4S2 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
GSX1Q9H4S2 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
GSX1Q9H4S2 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC18.74■□□□□ 0.59
GSX1Q9H4S2 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
GSX1Q9H4S2 AC022211.4-201ENST00000625094 2161 ntBASIC18.74■□□□□ 0.59
GSX1Q9H4S2 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
GSX1Q9H4S2 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.74■□□□□ 0.59
GSX1Q9H4S2 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
GSX1Q9H4S2 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
GSX1Q9H4S2 CROCCP5-201ENST00000436658 830 ntBASIC18.74■□□□□ 0.59
GSX1Q9H4S2 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
GSX1Q9H4S2 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.74■□□□□ 0.59
GSX1Q9H4S2 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.74■□□□□ 0.59
GSX1Q9H4S2 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
GSX1Q9H4S2 MED17-227ENST00000640521 2047 ntTSL 5 BASIC18.74■□□□□ 0.59
GSX1Q9H4S2 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
GSX1Q9H4S2 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
GSX1Q9H4S2 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
GSX1Q9H4S2 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
GSX1Q9H4S2 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
GSX1Q9H4S2 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
GSX1Q9H4S2 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
GSX1Q9H4S2 KRT18P61-201ENST00000585825 1298 ntBASIC18.73■□□□□ 0.59
GSX1Q9H4S2 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
GSX1Q9H4S2 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.73■□□□□ 0.59
GSX1Q9H4S2 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
GSX1Q9H4S2 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC18.73■□□□□ 0.59
GSX1Q9H4S2 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
GSX1Q9H4S2 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
GSX1Q9H4S2 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC18.73■□□□□ 0.59
GSX1Q9H4S2 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
GSX1Q9H4S2 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
GSX1Q9H4S2 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC18.73■□□□□ 0.59
GSX1Q9H4S2 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
GSX1Q9H4S2 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
GSX1Q9H4S2 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
GSX1Q9H4S2 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
GSX1Q9H4S2 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC18.72■□□□□ 0.59
GSX1Q9H4S2 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
GSX1Q9H4S2 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.72■□□□□ 0.59
GSX1Q9H4S2 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
GSX1Q9H4S2 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.72■□□□□ 0.59
GSX1Q9H4S2 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
GSX1Q9H4S2 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
GSX1Q9H4S2 AL499627.2-201ENST00000606283 725 ntBASIC18.72■□□□□ 0.59
GSX1Q9H4S2 NKILA-201ENST00000613231 537 ntTSL 4 BASIC18.72■□□□□ 0.59
GSX1Q9H4S2 AC131274.2-201ENST00000580697 1507 ntBASIC18.72■□□□□ 0.59
GSX1Q9H4S2 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
GSX1Q9H4S2 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
GSX1Q9H4S2 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
GSX1Q9H4S2 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
GSX1Q9H4S2 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GSX1Q9H4S2 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC18.71■□□□□ 0.59
GSX1Q9H4S2 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GSX1Q9H4S2 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GSX1Q9H4S2 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GSX1Q9H4S2 AC138932.3-201ENST00000567634 1902 ntBASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms