Protein–RNA interactions for Protein: Q9H251

CDH23, Cadherin-23, humanhuman

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23Q9H251 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CDH23Q9H251 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC23.98■■□□□ 1.43
CDH23Q9H251 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC23.98■■□□□ 1.43
CDH23Q9H251 RPS2P52-201ENST00000469610 820 ntBASIC23.97■■□□□ 1.43
CDH23Q9H251 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
CDH23Q9H251 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC23.97■■□□□ 1.43
CDH23Q9H251 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CDH23Q9H251 MPST-204ENST00000404393 1329 ntTSL 5 BASIC23.97■■□□□ 1.43
CDH23Q9H251 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC23.97■■□□□ 1.43
CDH23Q9H251 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CDH23Q9H251 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CDH23Q9H251 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC23.96■■□□□ 1.43
CDH23Q9H251 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC23.96■■□□□ 1.43
CDH23Q9H251 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CDH23Q9H251 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CDH23Q9H251 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CDH23Q9H251 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC23.95■■□□□ 1.43
CDH23Q9H251 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC23.95■■□□□ 1.43
CDH23Q9H251 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.43
CDH23Q9H251 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC23.95■■□□□ 1.43
CDH23Q9H251 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
CDH23Q9H251 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
CDH23Q9H251 MFSD11-216ENST00000590393 1141 ntBASIC23.95■■□□□ 1.42
CDH23Q9H251 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CDH23Q9H251 AC087239.1-201ENST00000622671 572 ntBASIC23.95■■□□□ 1.42
CDH23Q9H251 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
CDH23Q9H251 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CDH23Q9H251 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
CDH23Q9H251 OAS3-207ENST00000551007 998 ntTSL 2 BASIC23.95■■□□□ 1.42
CDH23Q9H251 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CDH23Q9H251 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
CDH23Q9H251 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC23.94■■□□□ 1.42
CDH23Q9H251 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
CDH23Q9H251 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
CDH23Q9H251 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CDH23Q9H251 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC23.94■■□□□ 1.42
CDH23Q9H251 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
CDH23Q9H251 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CDH23Q9H251 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
CDH23Q9H251 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CDH23Q9H251 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
CDH23Q9H251 METTL15-202ENST00000403099 795 ntTSL 5 BASIC23.93■■□□□ 1.42
CDH23Q9H251 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC23.93■■□□□ 1.42
CDH23Q9H251 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
CDH23Q9H251 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC23.93■■□□□ 1.42
CDH23Q9H251 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
CDH23Q9H251 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC23.93■■□□□ 1.42
CDH23Q9H251 STK32C-205ENST00000456004 607 ntTSL 2 BASIC23.93■■□□□ 1.42
CDH23Q9H251 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC23.93■■□□□ 1.42
CDH23Q9H251 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC23.92■■□□□ 1.42
CDH23Q9H251 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC23.92■■□□□ 1.42
CDH23Q9H251 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
CDH23Q9H251 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC23.92■■□□□ 1.42
CDH23Q9H251 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
CDH23Q9H251 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC23.92■■□□□ 1.42
CDH23Q9H251 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CDH23Q9H251 KRT19P1-201ENST00000405746 1186 ntBASIC23.92■■□□□ 1.42
CDH23Q9H251 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC23.92■■□□□ 1.42
CDH23Q9H251 AC073210.2-201ENST00000430369 194 ntBASIC23.92■■□□□ 1.42
CDH23Q9H251 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
CDH23Q9H251 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC23.92■■□□□ 1.42
CDH23Q9H251 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
CDH23Q9H251 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CDH23Q9H251 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
CDH23Q9H251 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
CDH23Q9H251 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC23.91■■□□□ 1.42
CDH23Q9H251 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
CDH23Q9H251 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CDH23Q9H251 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
CDH23Q9H251 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC23.91■■□□□ 1.42
CDH23Q9H251 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
CDH23Q9H251 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
CDH23Q9H251 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CDH23Q9H251 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
CDH23Q9H251 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CDH23Q9H251 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC23.91■■□□□ 1.42
CDH23Q9H251 PFKL-212ENST00000628044 129 ntTSL 3 BASIC23.91■■□□□ 1.42
CDH23Q9H251 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CDH23Q9H251 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC23.9■■□□□ 1.42
CDH23Q9H251 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
CDH23Q9H251 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC23.9■■□□□ 1.42
CDH23Q9H251 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC23.9■■□□□ 1.42
CDH23Q9H251 MDK-213ENST00000617138 635 ntTSL 2 BASIC23.9■■□□□ 1.42
CDH23Q9H251 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CDH23Q9H251 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
CDH23Q9H251 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC23.9■■□□□ 1.42
CDH23Q9H251 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.42
CDH23Q9H251 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
CDH23Q9H251 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC23.89■■□□□ 1.42
CDH23Q9H251 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
CDH23Q9H251 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.42
CDH23Q9H251 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
CDH23Q9H251 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC23.89■■□□□ 1.42
CDH23Q9H251 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC23.89■■□□□ 1.42
CDH23Q9H251 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
CDH23Q9H251 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
CDH23Q9H251 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC23.89■■□□□ 1.41
CDH23Q9H251 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
CDH23Q9H251 AL596275.1-201ENST00000423464 877 ntBASIC23.88■■□□□ 1.41
CDH23Q9H251 ITM2C-210ENST00000620962 501 ntBASIC23.88■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms