Protein–RNA interactions for Protein: Q9H078

CLPB, Caseinolytic peptidase B protein homolog, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPBQ9H078 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CLPBQ9H078 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CLPBQ9H078 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC22.28■■□□□ 1.16
CLPBQ9H078 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CLPBQ9H078 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CLPBQ9H078 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC22.28■■□□□ 1.16
CLPBQ9H078 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC22.28■■□□□ 1.16
CLPBQ9H078 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC22.28■■□□□ 1.16
CLPBQ9H078 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC22.28■■□□□ 1.16
CLPBQ9H078 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CLPBQ9H078 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CLPBQ9H078 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CLPBQ9H078 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CLPBQ9H078 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CLPBQ9H078 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CLPBQ9H078 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CLPBQ9H078 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
CLPBQ9H078 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC22.27■■□□□ 1.16
CLPBQ9H078 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CLPBQ9H078 AC079630.1-202ENST00000618127 1840 ntBASIC22.27■■□□□ 1.16
CLPBQ9H078 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC22.27■■□□□ 1.16
CLPBQ9H078 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CLPBQ9H078 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CLPBQ9H078 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CLPBQ9H078 HYI-206ENST00000372434 1025 ntTSL 5 BASIC22.27■■□□□ 1.16
CLPBQ9H078 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC22.27■■□□□ 1.16
CLPBQ9H078 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC22.27■■□□□ 1.16
CLPBQ9H078 AF213884.3-201ENST00000563833 479 ntBASIC22.27■■□□□ 1.16
CLPBQ9H078 MIR4767-201ENST00000582827 78 ntBASIC22.27■■□□□ 1.16
CLPBQ9H078 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC22.27■■□□□ 1.16
CLPBQ9H078 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.15
CLPBQ9H078 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
CLPBQ9H078 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC22.26■■□□□ 1.15
CLPBQ9H078 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CLPBQ9H078 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
CLPBQ9H078 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CLPBQ9H078 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CLPBQ9H078 PTCHD3P2-201ENST00000424937 1205 ntBASIC22.26■■□□□ 1.15
CLPBQ9H078 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC22.26■■□□□ 1.15
CLPBQ9H078 AP001330.3-201ENST00000520123 633 ntBASIC22.26■■□□□ 1.15
CLPBQ9H078 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
CLPBQ9H078 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC22.26■■□□□ 1.15
CLPBQ9H078 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CLPBQ9H078 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
CLPBQ9H078 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC22.26■■□□□ 1.15
CLPBQ9H078 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
CLPBQ9H078 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC22.25■■□□□ 1.15
CLPBQ9H078 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CLPBQ9H078 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CLPBQ9H078 MIR939-201ENST00000401314 82 ntBASIC22.25■■□□□ 1.15
CLPBQ9H078 PTMA-205ENST00000410064 814 ntTSL 2 BASIC22.25■■□□□ 1.15
CLPBQ9H078 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
CLPBQ9H078 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CLPBQ9H078 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CLPBQ9H078 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CLPBQ9H078 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC22.24■■□□□ 1.15
CLPBQ9H078 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CLPBQ9H078 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CLPBQ9H078 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CLPBQ9H078 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
CLPBQ9H078 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CLPBQ9H078 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CLPBQ9H078 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CLPBQ9H078 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CLPBQ9H078 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC22.24■■□□□ 1.15
CLPBQ9H078 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CLPBQ9H078 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
CLPBQ9H078 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
CLPBQ9H078 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CLPBQ9H078 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
CLPBQ9H078 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CLPBQ9H078 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CLPBQ9H078 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CLPBQ9H078 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CLPBQ9H078 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC22.23■■□□□ 1.15
CLPBQ9H078 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CLPBQ9H078 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CLPBQ9H078 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
CLPBQ9H078 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CLPBQ9H078 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CLPBQ9H078 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CLPBQ9H078 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CLPBQ9H078 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CLPBQ9H078 DUSP8P3-201ENST00000399571 1760 ntBASIC22.22■■□□□ 1.15
CLPBQ9H078 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CLPBQ9H078 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CLPBQ9H078 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC22.22■■□□□ 1.15
CLPBQ9H078 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
CLPBQ9H078 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC22.22■■□□□ 1.15
CLPBQ9H078 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC22.22■■□□□ 1.15
CLPBQ9H078 AC006455.2-201ENST00000429931 906 ntBASIC22.22■■□□□ 1.15
CLPBQ9H078 AC105265.2-201ENST00000467189 838 ntBASIC22.22■■□□□ 1.15
CLPBQ9H078 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
CLPBQ9H078 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC22.22■■□□□ 1.15
CLPBQ9H078 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CLPBQ9H078 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC22.22■■□□□ 1.15
CLPBQ9H078 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC22.21■■□□□ 1.15
CLPBQ9H078 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
CLPBQ9H078 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
CLPBQ9H078 NKILA-201ENST00000613231 537 ntTSL 4 BASIC22.21■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms